Sedimentibacter sp. zth1: JYG23_02715
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Entry
JYG23_02715 CDS
T07110
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00550
Peptidoglycan biosynthesis
sedz01100
Metabolic pathways
sedz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYG23_02715
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYG23_02715
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sedz01003
]
JYG23_02715
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
JYG23_02715
Enzymes [BR:
sedz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JYG23_02715
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JYG23_02715
Glycosyltransferases [BR:
sedz01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JYG23_02715
Peptidoglycan biosynthesis and degradation proteins [BR:
sedz01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JYG23_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PulA_N1
SHOCT
VirDNA-topo-I_N
CLLAC
sCache_2
Pes-10
Motif
Other DBs
NCBI-ProteinID:
QSX06391
UniProt:
A0A974XHX0
LinkDB
All DBs
Position
complement(567125..570514)
Genome browser
AA seq
1129 aa
AA seq
DB search
MSTNNNKNIKNNQGKDPKNKKPKKKKKKIKIWRVLLLMLLAAIIITAIVVGVMVIKVIGD
APKIDPTNILGTLPQSSVILDQNGNLVEQIHDANENRDIVKIEKMPKHLQDAFVSIEDKR
FETHFGIDIKRIFGALLSNFKSGNLTGQGASTITQQLVKNLYLTGDKALERKIKEAYLAI
QMERKLTKSQILENYLNTISLGQSTYGVEAAAYAYFSKNVEDLTIAESASLAAIPKSPTK
YAPFNRVSLYNLEGIAEEDIVGYVYIDSIQYACVFNETGLKRQKIVLKEMLNSGKLTQEE
YDEAINEDIRTTLKPGQKKIEGITANNFTDYVKKQVIADLMRVHKLTYEEAQSYLYKGGL
SIYTTMDVEMQKTIEKTYENFGEILLGKTPPESKPLLQDWRGFRWVGNTGVGTLDKYNNV
LNDTGHVLYFEHNNLMDDSNTVYLLPSEYTNDEDGNLIITSKKLNIYTSTLDIVNCYTVD
EKNQLVTHNVSGLNIGNNYEIVDKKGTKGTVKIFKEFLDKSPDFFSIDADNVIYINNNYY
TYEERGIVQPQSATVILDHRTGQIKALIGGRNIVGSNTFNRAVDSARQPGSTIKPICVYL
SAIDHGYTSSSIIDDIPMYNEKGQRWPKNWFEYYNSKPFKYSGLTTIRYSLEQSINTNAV
YMYNTLGAETCIDYLSKLGLIDKENPENDTFVTPEENRAYNDINPSSLALGGLTKGFSPL
KMAAAYGTIANGGVYTEPISYTKVIDSKGKIIIDNTPKTNVAVAPEVAFIVEDMLRTTVT
NGLSSAASLKALGIDMAAKTGTTQNNGDLWCIGFSPYYTASVWVGNDNASMKLSQSSTTT
ARLLGAIMTTIHSDKQPAKFEVPDGVVQVQVCKQSGKIPTELCSQDPRGSQIVTEYFVKG
TEPKETCKTHVSRKVCKDSNLLPNQFCPESSIIDKVFITREVLYNPSLYPDVKNATYEKL
LEANKLYLQIKQDIRNGSTEQDILDTYPGLVTLKITNINNNDNNNTKQTIEILSIYGIPV
DQLEYRTMFTEDFQYQEPIYPCNVHNYNTWYDSIKDDEDKSDGDENDDEDGDVETPENPD
DENQDNNNGNDNDDNNGNGNGNGNNNGDDNSGEEEEPGDDSNIDIITND
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaataataataaaaatataaaaaacaatcaaggtaaagaccccaaaaacaaa
aaacctaaaaagaaaaaaaagaaaattaaaatatggcgagtattacttttaatgttactt
gcagcaattattataactgccatagtagtaggtgtaatggtaattaaagtaattggagat
gctccaaaaattgatccaacaaatatacttggtacattacctcaaagttcagttatttta
gatcaaaatggtaatcttgttgagcaaatacatgatgcgaatgaaaatcgtgatatagtt
aagatagagaaaatgcctaaacatttacaagatgcttttgtttcaattgaggacaaaaga
tttgaaactcactttggtatagatataaaacgtatctttggtgcattattaagcaacttt
aagagtggaaatttaactggtcaaggtgcaagtacaataacacaacagctagttaaaaat
ttatacctaactggcgataaagctttagaaaggaaaataaaagaagcgtatctcgctatt
caaatggaaagaaaacttacaaaaagtcaaatacttgaaaactatttgaatacaatatca
cttggtcaaagtacttatggagtggaagctgctgcatatgcttatttttctaaaaatgtt
gaagatttaacaattgctgaaagcgcatctttggcagcaattccaaaaagtccaactaag
tatgcacctttcaatagagtatcattatataatctggagggtatagctgaagaagatatt
gtaggatatgtttatattgactctatacaatatgcttgtgtattcaatgaaactggttta
aaaagacaaaagatagttcttaaagaaatgcttaattcaggaaaattaactcaagaggaa
tatgatgaagcaataaacgaggacataagaactactttaaaaccaggacaaaagaaaatt
gaaggaattactgcaaacaattttactgactatgtaaaaaaacaggttattgcagacctt
atgcgtgttcataaattaacatatgaagaagcacaaagctatttatacaaaggtggctta
agtatttacaccactatggatgtagaaatgcaaaaaactattgaaaaaacgtatgaaaac
tttggagaaatccttctaggaaaaacacctcctgaaagcaaaccattattacaagattgg
agaggttttagatgggtaggaaatactggagtaggaacactagacaaatataacaacgta
ttaaatgacacaggtcatgtattatattttgaacataacaatttaatggatgactcaaat
actgtatacctacttcctagtgaatatactaatgatgaagatggaaatttaataattact
tcaaaaaaattaaatatttatacttcaactttagacattgtgaactgttatacagttgat
gaaaaaaatcaattagtaacacacaatgtatctggattaaatataggaaataattatgaa
attgttgataaaaaaggaactaaaggaacagttaaaatatttaaagagtttttagacaaa
tcacctgatttctttagtatagatgcagataatgttatatatataaataacaattattac
acttatgaagaaagaggtatagttcagccgcaatcagctacagtaatacttgatcataga
actggtcaaataaaagcattgattggtggtagaaatatcgttggtagtaatacatttaat
agagccgtagattcagcaagacaaccaggttctacaattaaaccaatttgtgtttattta
tcagctatagaccatggatatacatcatcatcaataattgatgatattcctatgtacaat
gaaaaaggtcaaagatggcctaaaaactggtttgaatattataattcaaaaccttttaaa
tactcaggattaacaacaattcgttactcacttgagcaatctatcaataccaacgctgta
tatatgtataatactcttggagcagaaacatgtatcgattatttatccaagttaggttta
attgataaagaaaatcctgaaaatgatacttttgttacaccagaagaaaatcgagcatac
aatgacattaacccttcttcattagcattaggaggattaacaaaaggtttttcgccatta
aaaatggctgcagcttacggaactatcgcaaatggtggtgtatatacggaaccaattagt
tacactaaagtcatagatagcaaaggaaaaataataatagataatactccaaaaacaaat
gttgcagtagccccagaagtagcatttattgtagaagatatgttacgtacaacagtaaca
aatggtttatcatcagctgcttcattaaaagcattaggcattgatatggctgctaaaact
ggtactactcaaaacaatggtgatttatggtgtattggattttcaccatattatacagca
tctgtttgggtaggtaatgataatgcatcgatgaagttatctcaaagcagtacgacgaca
gctagattattaggagctattatgacgacaatacattcagataaacaaccagctaaattt
gaagttcccgatggagttgttcaagtacaagtttgtaagcaatctggcaaaatacctact
gaactttgctctcaagatccaagaggaagtcaaattgtaactgagtattttgttaaagga
acagaaccaaaagaaacttgtaaaacacacgtttcaagaaaagtttgtaaagattcaaat
ttgctaccaaatcagttctgtcctgaatcatcaattatagataaggtatttataacaaga
gaggttttatataatccatcattatatcccgatgttaaaaatgctacttatgaaaaatta
ttggaagcaaacaaattgtatcttcaaataaaacaagatattagaaatggttctacagaa
caagatatactagatacttatcctggtcttgtaacccttaagattacaaatattaataat
aatgataacaacaatactaaacaaacaattgaaatattaagcatatatggtataccagtt
gatcaacttgaatatagaacgatgtttacagaagattttcaatatcaagaaccaatatac
ccatgtaatgttcataattataatacttggtatgattcaataaaagatgacgaagacaaa
tcagatggtgatgaaaacgatgacgaagatggagatgttgagactcctgaaaatcctgat
gatgagaatcaagataataataatggaaacgataacgatgacaacaacggtaatggaaat
ggtaatggaaacaacaatggtgatgataattctggagaagaagaagaaccaggtgatgat
agcaacatagatataataactaatgattaa
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