Sedimentibacter sp. zth1: JYG23_03295
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Entry
JYG23_03295 CDS
T07110
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_03295
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYG23_03295
Archaeal homologous recombinant proteins
JYG23_03295
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QSX06498
UniProt:
A0A974XDZ5
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Position
679948..681171
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AA seq
407 aa
AA seq
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MKILHTGDWHLGKSLEGHSRMDEQELFLNDFVQIVERNNVDFVIIAGDIYDSSNPPARAE
KMFYNTLKKLSKNGERLTLVIAGNHDSPERLVAAGPLAMEHGIIMVGTPKTVVGIGEYGK
HKVLNSGEGFIEIEINGERAVILTVPYPSEKRLNEALYGDMDSDEERLEAYGDRIKELFN
KLSKNYREDTINLVVSHLFSMGSEESGSERSIQLGGSYIVDGSCFPNNAQYIALGHVHKP
QIVPHTDKRARYSGSPLHYNKKEISFTKKCFVIDIEAGKQADVKDINFKVYKPIEIWKCN
NLDEALEKCEENKNRDCYVYLEIKTDSYIKEDEIKALKDLKDDILEITPIISGINDDNDD
SVRLSEQTFDEIFRSFYKKERGVDADDEIVELLQSILMGDENINETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattttacatacaggggactggcatctaggcaaaagcttagagggtcacagtaga
atggatgaacaagagctatttctcaatgattttgtacaaatagtcgaaagaaataatgta
gacttcgtaattattgcgggtgatatatatgatagtagtaatccaccagctcgtgctgag
aaaatgttttacaatactttaaaaaaactttcaaaaaatggggagaggttgacacttgtt
atagctggaaatcatgatagcccggaaagactagttgcagccggacctcttgcaatggag
catggaattataatggttggaacaccaaaaacagttgttggaattggtgaatatggaaaa
cataaagttttgaattctggtgagggttttatagaaattgaaattaatggtgagagagct
gttatattgacagtaccttatccaagtgaaaaaagattaaatgaagctttgtacggtgat
atggattctgacgaagaaagacttgaagcatatggggatagaataaaagagttatttaat
aaattaagtaaaaattatagagaagatacaataaatttagttgtttcacatttatttagt
atgggtagtgaagaaagtggttctgagagaagtattcagttaggtggaagctatatcgtt
gatggaagttgtttccctaataatgctcagtatattgcacttggacatgttcataagcca
caaatagtaccccatacagataaaagagcaagatattcaggttcgccactacattataat
aaaaaagaaatatcttttacaaaaaaatgctttgtcatagatatagaggcaggaaaacaa
gcagatgttaaagatataaattttaaagtttataaacctattgaaatttggaaatgtaat
aatttagatgaagctcttgaaaaatgcgaagaaaataaaaatagagattgctatgtatat
ttagaaataaaaactgatagctacataaaagaagatgaaataaaggctctaaaggattta
aaagatgatatacttgaaattactcctataataagtggtataaatgatgataatgatgat
tctgtaagattatcagagcaaacatttgatgaaatatttagaagtttttacaaaaaagaa
agaggagtagatgcagatgatgaaatagttgagcttttgcaatctatacttatgggagat
gaaaatataaatgaaaccaattaa
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