Sedimentibacter sp. zth1: JYG23_03335
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Entry
JYG23_03335 CDS
T07110
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_03335 (miaB)
Enzymes [BR:
sedz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JYG23_03335 (miaB)
Transfer RNA biogenesis [BR:
sedz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JYG23_03335 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QSX06505
UniProt:
A0A975AGJ3
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Position
690316..691635
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AA seq
439 aa
AA seq
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MSKTFHILTYGCQMNEHDSEKICGMLNSIGYKEIDNNNADLVILNTCLIRENAAQKVFGK
LGELKGLKRNNPNMLISVCGCMMQKDDVREKTLKQCPFVDIIFGTNNIHELPELIKKAQT
EKLKAVHIIENTVEIHEEMPKVRKYKHKALINITYGCNNFCTYCVVPYTRGREKSREPED
ILAEIKDLASNGCKEVTLLGQNVNSYGNTLSRDYSFADLLYDINKIDGIEFIRFMTSHPK
DLSDDLIKAIKECDKICNHVHLPVQSGSTKVLNEMNRRYTKEHYLGLVEKIRREIPDAAI
TTDIIIGFPGETEEDFLETVDLVKKVKYESAFTFLYSIREGTKAATMENQIPDDIKHDRF
NRLLEELYPIVLDKNKECIGKTYRILIDGVSKNSDDYLTGRSEHFRLVHFKGDKSLIGKI
VNVKIDSAKTFFLEGTIQK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacttttcatattttaacatacggctgccaaatgaatgaacacgattcagaa
aaaatatgtggtatgttaaattcaattggatataaagagatagataataacaatgctgat
ttggttatattaaatacttgtttaattagagagaacgcagcacaaaaggttttcggaaaa
ttaggagagcttaaaggcttgaaaagaaataatcctaatatgttaatttcagtttgtgga
tgcatgatgcaaaaagatgatgtaagagagaaaactcttaagcaatgtccatttgtagat
ataatttttggtactaacaatatacacgaattacctgaattgattaagaaagctcaaact
gaaaaattaaaagctgttcatattatagaaaatacagttgaaattcatgaggaaatgcct
aaagttcgtaaatataaacataaagcactgattaatattacttatggttgcaataatttt
tgtacttattgtgtagttccttacacaagaggtagagagaagagtagagaaccagaggat
attttagcagaaatcaaagatttagcatcaaatggctgcaaggaagtaacattacttgga
caaaatgtgaattcatatggcaatacattgtctagagattatagcttcgctgatttactg
tatgatataaataaaattgatggaattgaatttatcagatttatgacatcacatccaaaa
gatttatcagatgatttaataaaagcaataaaagaatgcgataaaatatgtaatcatgtt
catcttcctgttcaatcgggtagtacaaaagtgcttaatgaaatgaatagaagatacact
aaggaacactatttaggcttagttgagaaaataagaagagaaatacctgacgcggcaata
actacagatattattattggttttcctggtgaaacagaggaagatttcttagaaactgtt
gatttagttaaaaaggtaaaatatgaatcggcatttacgtttctatactctattagagaa
ggaacaaaagccgcaactatggaaaatcaaatacctgatgatataaaacatgatagattt
aatagattacttgaagaattatatccaatcgttcttgacaaaaataaagaatgtataggt
aagacatatagaatccttatagatggagttagcaaaaactcagatgattatttaactggt
agatctgagcattttagacttgttcattttaaaggtgataaaagcttaattggtaaaatt
gtaaatgttaaaatagatagtgcaaagacatttttcttagagggaactattcaaaaataa
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