Sedimentibacter sp. zth1: JYG23_05025
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Entry
JYG23_05025 CDS
T07110
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JYG23_05025 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_05025 (xseB)
Enzymes [BR:
sedz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JYG23_05025 (xseB)
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JYG23_05025 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TPR_IF140_C
KxDL
DUF5446
FRB_dom
Motif
Other DBs
NCBI-ProteinID:
QSX06814
UniProt:
A0A975AFT4
LinkDB
All DBs
Position
complement(1019608..1019820)
Genome browser
AA seq
70 aa
AA seq
DB search
MVDKSENYESFEQAMDVLKSTVQNLEKGSSVKLDNLIQNYEKGINAYNYCINKLEQTKKQ
INIINNNEII
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtagataaaagtgaaaattatgaaagttttgagcaagcaatggatgttctaaaaagt
actgttcaaaatttagaaaaaggtagttcagtaaaattagataatttaatacaaaattat
gaaaaaggtatcaatgcatacaattattgtataaataaattagaacaaacaaaaaaacaa
ataaatattataaataataatgaaataatataa
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