Sedimentibacter sp. zth1: JYG23_05300
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Entry
JYG23_05300 CDS
T07110
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JYG23_05300 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_05300 (priA)
Enzymes [BR:
sedz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JYG23_05300 (priA)
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYG23_05300 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
AAA_30
AAA_19
PIF1
AAA_11
SLFN-g3_helicase
NPHP3_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QSX06864
LinkDB
All DBs
Position
complement(1069460..1071688)
Genome browser
AA seq
742 aa
AA seq
DB search
MYPKFVHVVINYNSKSTDLIYTYGVPECFCKTIMIGKRVKVTFSRKKETIDALVVKISDK
TSVPVNKIKPILGVIDEEVIIKPELIKLAVWMRERYICKYSDVVRLMVPSQIKYEHNKNT
SIKYEKLIYLIDKEKPIEQYQVKNAPKQRKAIQLLKNYDKVLLKEFTSGNDISIATINTL
FSKDIISIEEKLYINEEKLYDKFINKLNEEQKYCYDEIINSKDKIYLLHGITGSGKTEVY
INVIEYYRKLGKQSILLVPEISLTSQTIGRLRNGFGSRVAVFHSKLTAKQKYIEWNKVLN
NEVDVIVGARSALFAPVKNLGCIIVDEEHEESYKSSTSPKYDTIETAIKRGFIENAKVIL
GSATPSLRTFNMVKNKHVRLLEIKKRAKKANLPKIKIIDMKKEIENGNDTILSVELFKRI
RYSLKNKEQVILFINRRGYSNFIACKKCGYVTKCDNCDVSMTYHSSLNKLKCHYCGNTKS
VFDKCPECGSNRIEQFGFGTQQAEELVKGLFKDSVVARMDMDTMTSKNSFNEIYNDFKTH
KIDILIGTQMLAKGLDFPDVTTVGVLSADSLLNLPFYNSGEKTFQLLTQVSGRAGRGEKK
GYVYIQTYEPDNCIINAAKDNNFEEFIEDEFLLRKEFAYPPFVNIINVCTISKDESLLKS
VSMEKYNLLKSKIQELIKGKGVLLYNPTPNAIYKVNNEYRINLYMKVSLNNASKLKSIIR
EVYMEKDIKNIKLSINIDTESV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgtatccaaaatttgttcatgttgttattaattataactcaaaaagtacagatttaata
tatacatatggagttccagaatgcttttgcaaaacaataatgataggtaaaagagttaaa
gttaccttctctagaaaaaaagagacaatagatgctcttgttgtaaaaatctctgataaa
acaagtgttccagttaataaaataaaaccgattttaggtgtaatagatgaagaagtaatt
ataaaacctgaacttataaaattagcagtttggatgcgagagagatatatatgtaaatat
tctgatgttgtaagacttatggtaccatcacaaataaaatatgagcataataaaaataca
agcataaagtatgaaaaattaatttatctaattgacaaagaaaaaccgattgaacaatat
caagtaaaaaatgcaccgaagcagcgtaaagctattcaattgctaaaaaattatgataag
gttttattaaaggagtttacttctggcaacgatataagcattgctacaatcaatacttta
tttagcaaagatattatttctattgaggaaaaactttatataaatgaggaaaaattatac
gacaaatttataaataaattaaatgaagaacaaaaatactgttatgatgaaataattaat
tcaaaggataaaatttatttgttgcatggaattactggtagcggaaaaactgaagtatat
attaatgttattgaatattataggaaactaggaaagcaatcaattttattagttccagaa
atatccttgacaagtcaaacaattggtaggcttagaaacggttttggaagtagagtggct
gttttccatagtaaattaacagcaaagcaaaaatatattgagtggaacaaagtattaaat
aatgaggtagatgtcattgttggagctaggtcagcattgtttgcacctgttaaaaattta
ggttgtataatagttgatgaggaacacgaagaaagctataaatcatctacatcacctaag
tatgacactatagaaactgcaataaaacgtggatttattgaaaatgctaaagttatacta
ggttccgcaacaccttcattgagaacatttaatatggttaaaaataaacatgttagactt
ttagaaataaaaaaaagagctaaaaaagcaaatttacctaaaataaaaattattgatatg
aaaaaagaaatagaaaatggtaatgatactattttgagtgtagaattgtttaaaagaatt
agatattctcttaaaaataaggagcaagtaattttatttattaatagaagaggttattca
aactttatagcatgtaaaaaatgtgggtatgttactaaatgtgataattgtgatgtatca
atgacttatcacagtagcttaaataaattaaaatgccattattgtggcaatactaaatca
gtatttgacaaatgtccagaatgtggtagtaatagaattgaacagtttgggttcggcaca
caacaggcagaggaattagtaaaggggttatttaaggatagtgttgtagctaggatggat
atggatactatgacatctaagaatagcttcaatgaaatatataatgattttaaaactcat
aaaatagatatattaattggaacgcaaatgcttgcaaaaggattagattttccggatgtt
acgacagttggagtattaagtgctgattcgcttttaaatttacctttttataactcagga
gaaaagacatttcagttattaacacaggtaagtggaagagctggtagaggcgaaaaaaaa
ggatatgtttatattcagacgtacgagcctgacaattgcattataaatgctgcaaaagat
aataattttgaagaatttatagaagatgaatttttattaagaaaagagtttgcatatcca
ccgtttgtgaatatcataaatgtttgcactatttctaaagatgaaagcttgttaaaaagt
gtttcaatggaaaaatataacctattaaaatcaaaaattcaagaattaattaagggtaaa
ggagtactattatataatcctactcctaatgctatatataaagtaaataatgaatacaga
ataaatttatatatgaaagtatctttaaataatgcatctaaattaaaaagtattattaga
gaagtatatatggaaaaagatataaaaaatataaaattaagtataaatattgacactgaa
agtgtttaa
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