Sedimentibacter sp. zth1: JYG23_06025
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Entry
JYG23_06025 CDS
T07110
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00362
Benzoate degradation
sedz00620
Pyruvate metabolism
sedz00650
Butanoate metabolism
sedz01100
Metabolic pathways
sedz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
JYG23_06025
00650 Butanoate metabolism
JYG23_06025
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JYG23_06025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedz02000
]
JYG23_06025
Enzymes [BR:
sedz01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
JYG23_06025
Transporters [BR:
sedz02000
]
Other transporters
Primary active transporters [TC:
3
]
JYG23_06025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
DUF4064
Motif
Other DBs
NCBI-ProteinID:
QSX06944
UniProt:
A0A974XBU6
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Position
complement(1191643..1192815)
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AA seq
390 aa
AA seq
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MSEILEILKQFWVGTGLSQLFQLDTELFGIMLPGELIMIGIACVFLYLAIKKGYEPYLLI
PIAFGMLLVNFPFADLMVKPEGTQNGGLLYYLYQGTNLGIYPPLIFLCIGAGTDFGPLIA
NPRSLLLGAAAQFGIFTTFIGAIALGFTGYEAASIGIIGGADGPTALYLTSQLAPKLLGP
IAIAAYSYMALVPIIQPPIMKALTTEKERKIKMEQLRVVSKTEKILFPIIVTIFVVLLLP
SAAALIGMLMLGNLLKESGVVPKLVDCIQNSLMYIVSILLGLTVGAKASAEMFLRAETLE
IILLGLIAFSIGTASGVLLGKLMCKLSHGKINPLIGAAGVSAVPMAARVVQKEGQRYNPA
NFLLMHAMGPNVAGVIGSAVAAGIMLMFFS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatattagagatattaaaacaattctgggttggtacaggcttatctcagttg
tttcaattagatacagagttattcggtattatgctaccaggagaattaataatgataggt
attgcttgcgttttcctatatttagctatcaaaaaaggatacgaaccatacttattgata
ccaatagcatttggtatgttgcttgtaaactttccttttgctgatcttatggtaaagccg
gaaggtacacaaaacggtggattattgtattatttatatcaaggtaccaatttaggtatt
tatcctccgttgatatttttatgtataggtgctggaactgactttggtccgttaatagct
aatcctagaagtttacttctaggggcagcagcacagtttggtatatttactacatttata
ggtgcaatagcattaggatttactggttatgaagcagcatctattggtataattggtgga
gcagacggtccaacagcattatatttaacatcacagcttgcacctaaattattaggtcca
atagctatagcggcttattcatatatggcattagttccaattattcagccacctataatg
aaggctttgactactgagaaggaaagaaaaattaaaatggaacagttaagagttgttagt
aaaactgaaaaaatacttttccctattatagttacaatatttgttgtattattacttcct
tcagcagcagctttaataggcatgttaatgcttggtaacttattgaaagaatcaggtgtt
gtaccaaaattagttgattgtatacaaaattctttaatgtacatagtttctattttactt
ggacttacagttggtgcaaaagctagtgcggaaatgtttttaagagctgaaacattagaa
ataatattattaggacttattgctttttctataggtactgcatcaggagtattgttagga
aagcttatgtgcaagctttcacatggtaaaattaacccgcttattggagcagctggggtt
tcagcagtaccaatggcagctagagtagttcaaaaagagggacaaagatacaatcctgca
aatttcttattaatgcatgcaatgggaccgaacgttgcaggtgttataggttcagcagtt
gcagcaggaattatgttaatgttctttagttaa
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