Sedimentibacter sp. zth1: JYG23_06135
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Entry
JYG23_06135 CDS
T07110
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00450
Selenocompound metabolism
sedz00970
Aminoacyl-tRNA biosynthesis
sedz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYG23_06135
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYG23_06135
Enzymes [BR:
sedz01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
JYG23_06135
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Gene cluster
GFIT
Motif
Pfam:
SelA
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Se-cys_synth_N
Beta_elim_lyase
Aminotran_5
DUF1397
Motif
Other DBs
NCBI-ProteinID:
QSX06964
UniProt:
A0A975AFY4
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Position
complement(1216053..1217450)
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AA seq
465 aa
AA seq
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MNKNAYFRNIPKVDILIEDERIKNIIKKNDRDLVIEIIRERTDELRKFITNSDSEQAIEE
RIANLIVDIVKSVNKITELNMKKVINGTGTILHTNLGRAIISEKIADRIKEIVTGYSNLE
YDIEKGERGERYSHFEDIVCRITGAEACMAVNNNAAAVMLILSTMAKGNEVIVSRGELVE
IGGSFRVPDVMIQSGSKLVEIGTTNKTHLSDYENAITEETKAFLKVHTSNYRIVGFTESV
GIKELSELSKKHSLPVIEDIGSGVLIDLSKYGLAYEPTVQESIRNGADVVCFSGDKLLGG
PQAGIIVGRKDLINKMKKNPLTRAMRIDKFTATALEAVFHEYLDEESAIKNIPVLSMITR
DIKEIEKQAESLMTKLSGCKEKATIEIEDCLSQIGGGSLPLERIKSKCISIKPNSITTQI
FENRLRNSQIPVIIRIANDKAIIDMRTIATNEIEILSQTIKNAFI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaatgcttattttagaaatattccaaaagtagatatacttattgaagatgaa
agaataaagaatattattaaaaaaaatgatagagatttagtgatagaaattattagggaa
agaactgatgaattgagaaaattcataaccaattctgacagtgaacaagctatagaagaa
agaatagccaatctaatcgtagatatagtaaaaagtgttaataaaataactgaactaaac
atgaaaaaggttataaatggtacaggaactattttacatactaatttaggaagagctata
atatctgaaaaaatagcggatagaattaaagaaattgttacaggttattctaatttagag
tatgatattgaaaaaggcgagaggggagaaagatactctcatttcgaggatattgtatgc
agaataactggggctgaagcatgtatggcagttaacaataatgcagcagcagtaatgtta
attcttagtactatggctaaaggcaatgaagtaatagtatcaagaggagaattagttgaa
ataggtggttcttttagggtgccagatgttatgattcaaagtggttctaagctcgtagag
attggtacaaccaataaaacacatttatcagactatgaaaatgctataacagaggaaacg
aaggctttcctaaaagttcatactagtaactatagaatagttggatttacagagtctgta
ggaatcaaggaacttagtgaattaagtaaaaaacacagtttgccagttatcgaggacata
gggagtggagttttgatagatttgagtaaatatggtttggcttatgagcctactgtacaa
gagtcaataagaaatggtgctgatgtagtatgctttagtggcgacaaactacttggaggc
ccacaggcaggaattattgttgggcgtaaagatttaattaacaaaatgaagaaaaacccg
ttaactcgtgctatgaggatagataaattcacagcaacagcattagaagcagtttttcat
gagtacctagatgaagaaagtgctataaaaaatatacctgtactttcaatgattacaaga
gatattaaagagatagaaaagcaagcagaaagtttgatgacaaaattatctggctgtaaa
gaaaaggcaacgatagaaatagaagattgtttatcacaaataggtggtggttcattacca
cttgaaagaataaaaagtaagtgtatatctataaaacctaatagtattacaacacaaatt
tttgaaaataggcttagaaattctcaaatcccagttattattagaattgctaatgataag
gccataatagatatgagaacaatagctacaaatgaaatagaaatactttcacagactata
aaaaatgcatttatttaa
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