Sedimentibacter sp. zth1: JYG23_06140
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Entry
JYG23_06140 CDS
T07110
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00450
Selenocompound metabolism
sedz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JYG23_06140 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_06140 (selD)
Enzymes [BR:
sedz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
JYG23_06140 (selD)
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JYG23_06140 (selD)
Prokaryotic type
JYG23_06140 (selD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
Motif
Other DBs
NCBI-ProteinID:
QSX06965
UniProt:
A0A974XE75
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All DBs
Position
complement(1217475..1218521)
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AA seq
348 aa
AA seq
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MSKKEVRLTQMTKTAGUAAKIGPETLAQVLCKLPKFKDDKLIVGLETSDDAAVYKINDEI
AMIQTVDFFTPVVDDPYVFGQIAAANSLSDVYAMGGEPRLALNIIGFPNCLDPSVMADIL
SGGASKVIEAGATLAGGHSIEDDEPKYGLCVTGFVNPKGIFKNYGAKPGDVLILTKQVGS
GIVNTAAKADMASKEIVDEAIIVMTSLNKKAKEVFEKYNISSCTDITGFGLIGHGIEMAE
SSNVTFDINIKDVPMISNIIEYAQMGLIPAGAYKNQAYFKGKVNYNEVKEEYIDVMFDPQ
TSGGLLVSVNENEAESIINDLEKSGIDTKFSIIGKVVEKQDKYINLHN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaagaagttagattaacacaaatgacaaaaactgctggctgagcagctaaa
attggtcctgagacccttgcacaagttttgtgtaagttacctaaatttaaggatgataaa
ttaatagttggattagaaacatctgacgatgcagcagtttataaaataaatgatgaaata
gcaatgattcaaacagtagatttttttacacctgtagttgatgatccatatgtatttgga
caaattgcagcagcaaattcattaagtgacgtatatgcaatgggaggagagccaagactt
gctttaaatattattgggtttccaaattgcctagatccgtcagttatggctgatatattg
agtggtggagcatccaaagttattgaagcaggtgctacattggcaggtggacattcgata
gaggatgatgaaccgaaatatggattatgtgtgacaggatttgtaaatccaaaaggaata
tttaagaattatggagcgaaaccaggtgatgtattaatcttaacaaagcaggtaggttct
ggtattgtaaacacagcagcaaaggcagatatggcttcaaaagagattgtagatgaagct
ataattgttatgacatctttaaataaaaaagcaaaagaagtatttgaaaaatacaatatt
agtagttgtactgatataacagggtttggtttgataggtcatggcattgaaatggctgaa
agtagcaatgttacattcgatataaatataaaagatgttccaatgatatcaaatattatt
gaatatgcacagatggggcttatacctgctggggcatataaaaatcaagcatactttaag
ggtaaagttaactataatgaagtaaaagaagaatatatagatgtaatgtttgacccacaa
acatcaggtggacttttagttagtgttaatgaaaatgaagccgaaagtattataaatgat
ttagaaaaatcaggtattgatacgaaattttcaataataggaaaggttgttgaaaaacag
gataaatatataaatttacacaattaa
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