Sedimentibacter sp. zth1: JYG23_07105
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Entry
JYG23_07105 CDS
T07110
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYG23_07105
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedz01007
]
JYG23_07105
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_07105
03029 Mitochondrial biogenesis [BR:
sedz03029
]
JYG23_07105
Enzymes [BR:
sedz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
JYG23_07105
Amino acid related enzymes [BR:
sedz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
JYG23_07105
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYG23_07105
Prokaryotic type
Other AARSs
JYG23_07105
Mitochondrial biogenesis [BR:
sedz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JYG23_07105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Condensation
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
QSX07104
UniProt:
A0A975AGZ6
LinkDB
All DBs
Position
complement(1391406..1393103)
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AA seq
565 aa
AA seq
DB search
MDFKQKVAEIFNNFDNELTINEAMQMIEIPSNQDLGDYAVPCFKFAKKYKKAPQMIAQDV
VNSIEKTDDFENIINIGPYVNFFVDKDHYAENILKQACNQKDKFGSSNIGNNKKVIVEFS
SPNIAKPFHIGHIRSTVIGHSLYKIYTYLGYDTVAINHLGDYGTQFGMLISAYKKWGNKE
EIEANPIPELLKLYVRFNKESEENEELREEARYWFKELEHDNDEAVQLWTWMREVSLNEF
NRVYDMFGIKFDSLAGESFYSDKMPAVVQELKDKNLLKESQGAQIVELGDYGLTDAVIMK
SDGSTLYATRDMAAAIYRKKTYDFYKNIYVVGAPQKLHFDQWRKVLDLMGYEWAKDCIHV
MFGTVSLEEGSLSTRNGRVVYLEDVLKKAIDKTKDIIEEKNSNLPNKEIVAKQVGIGAVI
FQELFNTRIKDYMFSWEKTLSFEGETGPYVQYTYARTCSVLKKANMDIIEDVDFSLLTDK
VSFNVIKRLDGFKNAVLSAHDKNEPYFITRYVVNLAQDFNRFYHECPIIVEDDSIKKSRL
LLTKIVNTTLKTALGLLGIEAPEKM
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggactttaagcaaaaagttgcagaaatatttaataattttgacaatgaattgacaatt
aatgaggcaatgcaaatgattgaaataccatctaatcaggatttaggtgattatgcagta
ccgtgctttaaattcgcaaaaaaatataaaaaggcaccacaaatgatagcacaggatgta
gttaacagcatagaaaaaactgatgattttgaaaacataataaatattggtccatatgta
aatttctttgtagataaagatcattatgcagaaaatattcttaaacaggcatgtaatcaa
aaagataaatttggaagcagtaatattggaaataataaaaaggttatagttgaattttca
tcgcctaatatagcaaaaccatttcatattggtcatatacgttcaactgttattggtcat
tcattatataaaatatatacatatctaggatatgatacagtagcaataaatcacttggga
gattatggaactcaatttggaatgttaatatcagcttataaaaaatggggaaacaaagaa
gaaatagaagcaaatccaataccagaattattaaagctatatgtgagatttaataaagag
tcagaagaaaatgaagaattaagagaagaagcaagatactggtttaaagagcttgaacat
gataatgatgaagcagtacaactttggacttggatgagagaagtaagtttaaatgaattt
aacagagtttatgatatgtttggtataaagtttgattcattagcaggggaaagcttttat
tcagacaagatgccagcagtagttcaagaattaaaagataagaacctgttaaaggaatca
cagggagcacaaatagttgagcttggagattatggacttactgatgcagttataatgaaa
agtgatggttcaacattatatgcaactcgtgatatggctgcggcaatatatagaaagaaa
acatatgatttttataaaaatatatatgtagttggtgcacctcaaaaacttcactttgac
caatggagaaaagttcttgatcttatgggatatgaatgggcaaaagattgtatacatgta
atgttcggaactgttagcttggaggaaggttcattatctactcgtaatggaagggtagta
tatttagaggatgttcttaaaaaagctattgataaaacaaaagacataatcgaagaaaaa
aattctaaccttccaaataaagaaattgttgcaaaacaggttggaattggtgcagtaata
ttccaggaattgtttaatacaagaattaaggattatatgttctcatgggaaaaaacattg
agtttcgaaggagagacaggaccatatgttcaatacacttatgcaagaacatgcagtgta
ttaaaaaaagctaatatggatataatagaagatgtagactttagtttattaacagataaa
gtatcatttaatgttataaaaagactagacggatttaaaaatgcagttttaagtgcacat
gacaagaacgaaccttattttataacaaggtatgtagtaaatctagcacaggatttcaat
agattttatcatgaatgccctataatagtggaagacgatagcattaaaaaatcaagactt
ttattaactaaaattgtgaatactacattaaaaactgcattaggacttttaggaatagaa
gcacctgaaaaaatgtaa
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