KEGG   Sedimentibacter sp. zth1: JYG23_07380
Entry
JYG23_07380       CDS       T07110                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sedz  Sedimentibacter sp. zth1
Pathway
sedz00521  Streptomycin biosynthesis
sedz00523  Polyketide sugar unit biosynthesis
sedz00525  Acarbose and validamycin biosynthesis
sedz00541  Biosynthesis of various nucleotide sugars
sedz01100  Metabolic pathways
sedz01110  Biosynthesis of secondary metabolites
sedz01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:sedz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JYG23_07380 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JYG23_07380 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JYG23_07380 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JYG23_07380 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JYG23_07380 (rfbB)
Enzymes [BR:sedz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JYG23_07380 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 3Beta_HSD adh_short Sacchrp_dh_NADP NAD_binding_10
Other DBs
NCBI-ProteinID: QSX07157
UniProt: A0A974XC82
LinkDB
Position
complement(1451896..1452876)
AA seq 326 aa
MKILVTGGAGFIGSNFIYYMLNKYDDYEIVCLDKLTYAGNIITLATALKNSRFKFIKGDI
ADRKLVYDLFEKEKFDIVVNFAAESHVDRSVTNPEIFLVTNVLGTQVLLDASNKYGVLRF
HQISTDEVYGDLPIERKDLYFTENSLIHTSSPYSASKASADLLVQAYYRTYGTPITISRC
SNNYGAFQFPEKLIPLMIIKALNKGKLPVYGNGLNVRDWLYVIDHCKAIDLIIHSDKVGE
VYNIGGHNEKSNIEVVKTILNKLNCDESLIEYVSDRPGHDRRYAINPEKICNEFGWNPTI
KFDEGISNTIQWYLNNKKWWMDLIEK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaaaatattagtaacaggtggagccggttttattggttcgaattttatctattatatg
cttaataaatatgatgattatgaaattgtctgtttagataagcttacatatgctggtaac
ataataacccttgctacagcgctaaaaaatagtagatttaagtttattaagggagacata
gctgatagaaaattagtttatgatttgtttgaaaaagagaaattcgatattgttgtaaat
tttgcagctgaaagtcatgtagacagatctgttacaaatccagaaatttttttagtgaca
aatgtattagggacgcaagtgttgctagatgcaagcaataaatatggtgttctcagattt
catcaaatttctacagatgaggtgtatggtgatttacctatagagagaaaagacttatat
tttacagaaaattcactaatacatacttcaagtccttattcggcaagtaaagcatcagct
gatttattggtacaagcttattatagaacatacggaactcctattacaatatcaagatgt
tcaaataattatggtgcatttcaatttcctgagaaattaattccattaatgataataaaa
gcattaaacaagggaaaacttcccgtatacggaaatgggttaaatgttagagattggctt
tatgtaatagaccattgtaaagctattgacttaattattcatagtgataaagtaggtgaa
gtatacaatataggtggtcataatgaaaaatcaaatattgaggttgtaaaaacaattcta
aacaaactaaattgtgatgaatcattgatagaatatgtttctgatagaccgggtcatgat
agaagatatgcaataaatccagaaaaaatatgtaatgaatttggttggaatccaacgata
aaatttgatgaaggaattagtaatactatacaatggtatttaaataacaaaaaatggtgg
atggatttaattgaaaaatag

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