Sedimentibacter sp. zth1: JYG23_08840
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Entry
JYG23_08840 CDS
T07110
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JYG23_08840 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sedz03019
]
JYG23_08840 (groL)
03110 Chaperones and folding catalysts [BR:
sedz03110
]
JYG23_08840 (groL)
03029 Mitochondrial biogenesis [BR:
sedz03029
]
JYG23_08840 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sedz04147
]
JYG23_08840 (groL)
Enzymes [BR:
sedz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JYG23_08840 (groL)
Messenger RNA biogenesis [BR:
sedz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JYG23_08840 (groL)
Chaperones and folding catalysts [BR:
sedz03110
]
Heat shock proteins
HSP60 / Chaperonin
JYG23_08840 (groL)
Mitochondrial biogenesis [BR:
sedz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JYG23_08840 (groL)
Exosome [BR:
sedz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JYG23_08840 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JYG23_08840 (groL)
Exosomal proteins of breast cancer cells
JYG23_08840 (groL)
Exosomal proteins of colorectal cancer cells
JYG23_08840 (groL)
Exosomal proteins of bladder cancer cells
JYG23_08840 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
QSX04811
UniProt:
A0A974X853
LinkDB
All DBs
Position
complement(1775413..1777041)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKLIQFDEAARRAMEKGVNTLADTVKVTLGPKGRNVVLGKSFGSPMITNDGVTIAREIE
LSDPFENMGAQLVREVATKTNDIAGDGTTTATLLAQAIIREGLKNVAAGANPMIIKKGIN
KAVEVAVEELKGLSKQVETSEDIAQVASVSASDETIGKLISQAMDKVGKDGVITVEESKT
MGTDLSVVEGMQFDRGYLSSYMVTDTEKMEAILDNPYILITDKKISNIQEILPVLEQIVQ
GGKSLLIIAEDVDGEALATLVVNKLRGTFNCIAVKAPGFGDRRKEMLKDIAILTGGEVIS
EELGYELKDATLEMLGTASTIKIDKENTTIVGGSGEKEQLDERVRQIRVQYEESTSEFDK
EKLQERLAKLTGGVAVINVGAATETEMKEKKLRIEDALNATRAAVEEGLVAGGGTALVSV
IPAVDKVVKELTGDARTGAQIIKRALEEPVRQIAINAGLEGSVIIEKVKASKKGYGFDAL
AEKYVDMIETGIVDPTKVTRSALQNAASVASMLLTTEAAVVEEPKENEPAMPPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattaattcaatttgatgaagcagcacgtcgtgctatggaaaaaggcgttaac
acattagcagatacagtaaaagttacattaggacctaagggaagaaatgttgtattagga
aaatcatttggttctccaatgattactaatgatggagttacaatagcaagagaaatagaa
ttatcagatccatttgaaaatatgggtgctcaacttgttagagaagtagcaactaaaaca
aatgatatagcaggtgatggaactacaacagcaacattattggctcaagctatcattaga
gaaggacttaaaaacgtagcagctggtgctaacccaatgattataaaaaaaggtatcaat
aaagctgtagaagtagcagttgaagaattaaaaggattatcaaagcaagtagaaacatct
gaagatatagcacaagttgcatcagtttcagcatcagatgaaactataggtaaattaata
tcacaagcaatggataaagttgggaaagatggcgttataactgttgaagaatctaaaact
atgggaacagacttatctgtagttgaaggtatgcaatttgatagaggatatttatcatca
tatatggtaactgatacagaaaaaatggaagctatattagataatccatatatattaata
acagataaaaaaatctctaatattcaagaaattttaccagttcttgagcaaatagttcaa
ggcggaaaatcattacttatcatagcagaagatgttgatggggaagcattagcaacatta
gtagtaaacaaattaagaggaacattcaactgtatagctgttaaagctcctggatttggt
gacagaagaaaagaaatgcttaaagatatagcaattttaacaggcggagaagttatatct
gaagaattaggatatgaattgaaagatgctactcttgaaatgttaggaactgcatctaca
attaaaatagataaagaaaacactacaatagttggtggttctggagagaaagagcaactt
gacgaaagagttagacaaattagagttcaatacgaagaatcaacttcagaatttgataaa
gaaaaattacaagaaagattagctaaattaacaggtggagttgcagttattaacgttgga
gcagcaacagaaactgaaatgaaagagaaaaaattaagaattgaagatgctttgaacgca
actcgtgcagcagttgaagaaggcttagtagctggtggtggaacagcattagtatcagta
atacctgcagttgataaagtagttaaagaattaactggagatgctagaactggtgctcaa
attataaaaagagcattggaagagccagtaagacaaatagctatcaatgctggattagaa
ggttcagttataattgaaaaagttaaagcaagtaaaaaaggctatggatttgatgcattg
gctgaaaaatatgttgatatgattgaaactggtatagttgatccaactaaagtaactcgt
tcagcattacaaaacgcagcaagtgttgcatcaatgttattgacaacagaagcagctgta
gtagaagaaccaaaagaaaatgaacctgcaatgcctccaatgggtggcggaatgccagga
atgatgtaa
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