Sedimentibacter sp. zth1: JYG23_09280
Help
Entry
JYG23_09280 CDS
T07110
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00300
Lysine biosynthesis
sedz00470
D-Amino acid metabolism
sedz01100
Metabolic pathways
sedz01110
Biosynthesis of secondary metabolites
sedz01120
Microbial metabolism in diverse environments
sedz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYG23_09280 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYG23_09280 (lysA)
Enzymes [BR:
sedz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JYG23_09280 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Microcin
Motif
Other DBs
NCBI-ProteinID:
QSX04891
UniProt:
A0A974XET2
LinkDB
All DBs
Position
complement(1903394..1904686)
Genome browser
AA seq
430 aa
AA seq
DB search
MIKKVKDNILYFDGCNTVELAQKYGTPIYVYSKNKIIKKCRELKKCFINKYQNVRVAYAA
KAFLTLTMCKIINEEQLCLDVVSGGELFIALKSGFPADKIEFNGNNKTQFELEYAIENDI
GRIIVDSLTEVEIIENICRNKNKKVKVLFRITPGVNINSHEYVATGKKDSKFGIPIEEGI
LFPYVKKAIDSKFVNFLGFHFHIGSQLHDNKPYLIALETSLKLIKDLKSKYNFVVEEINI
GGGFGIRYTDEDNVKPYSYFLDPIMKRIIEFFNQITIPIPTVVIEPGRSIVGEAGMTLYE
VGNIKEIKGVRTYVAVDGGMTDNIRPALYNSKHDCLVANKASTASTEKYTICGKCCESGD
ILIKDVYLPKIVEHDFIAVFSTGAYGYSMASNYNKNTIPAVILVSDGKSKIIVKRQTYDG
LIENDVLVDL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaagttaaagataatatactttattttgatggttgtaatacagttgaatta
gcacaaaagtatggaacaccaatttatgtttactcaaaaaataaaataataaaaaagtgt
cgtgaattaaaaaaatgttttataaataaatatcaaaatgttagggtagcctatgctgct
aaagcttttttaactcttacaatgtgtaaaataataaatgaagaacagctatgtcttgat
gtagtgtcaggtggagaattatttatagcattaaaatcaggcttcccagcagataaaata
gagtttaatggtaataacaaaacacaattcgaacttgaatatgccatagaaaatgacata
ggtagaataatagtcgatagcttaacagaggttgaaattattgagaatatttgtagaaat
aaaaataaaaaagtaaaagttctttttagaataacacctggagttaatataaattcacat
gaatatgtagcaacgggcaaaaaagattcaaaatttggtataccaatagaagaaggtatt
ttatttccttatgtgaaaaaagcaattgattctaaatttgtaaattttttaggtttccac
tttcatattggttctcagttgcatgataacaagccatatcttattgcattagaaacatca
ttgaaattaataaaagatttaaaaagtaaatacaattttgtagttgaagaaataaatatt
ggtggtggttttggaataagatatacagatgaagataatgttaaaccatattcatacttc
ttagatcccataatgaaaagaataattgaattttttaatcaaattactatacctattcca
actgttgtaattgaaccaggaagaagcattgttggagaggctggaatgacattatatgag
gtaggaaatattaaagaaataaaaggagttagaacttatgtagctgttgatggtggtatg
acagataatattagaccagctttgtacaattcaaaacatgattgcttagtagctaataaa
gcaagtacagcaagtacagagaaatatactatatgtggtaaatgttgcgaatcaggtgat
atattgataaaagatgtatatctaccaaagattgtagagcatgatttcattgctgtattt
tcaactggtgcatatggatattctatggcaagcaattataacaaaaatacaatacctgca
gttatattagtaagcgatggaaaaagtaagattattgtaaaaagacaaacgtatgatggt
ctaatagaaaatgatgtattagttgatttataa
DBGET
integrated database retrieval system