Sedimentibacter sp. zth1: JYG23_10035
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Entry
JYG23_10035 CDS
T07110
Name
(GenBank) HAMP domain-containing protein
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYG23_10035
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sedz01001
]
JYG23_10035
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sedz02022
]
JYG23_10035
Enzymes [BR:
sedz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JYG23_10035
Protein kinases [BR:
sedz01001
]
Histidine kinases
OmpR family
JYG23_10035
Two-component system [BR:
sedz02022
]
OmpR family
VicK-VicR (cell wall metabolism)
JYG23_10035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
PAS_9
PAS_10
HATPase_c_3
dCache_1
TssO
PAS
HATPase_c_2
Pro_Al_protease
FAST_2
PAS_8
DUF2232
Motif
Other DBs
NCBI-ProteinID:
QSX05025
UniProt:
A0A974XA66
LinkDB
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Position
complement(2069686..2071479)
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AA seq
597 aa
AA seq
DB search
MFKSIRWRIVIIYFLLIYLAMTIVGFFIITQFEKIQLDMNSDSIKQRITQIYASSTAMKQ
NDWEIEEIIEKIQSNINYSIQIGYNENLYIILNDDKKTIIAASKNEVENISAYDVDRISN
KILVEALSGVTTETITKDDEDNRVESHITYPVRNEMNQIKGYIYLTSDISYIYDTVNESK
TMLTKATLMVLLLTVILGLILSRTITGPIKELTINAKKMSQGDFAHKVKIKSDDEIGQLG
EVFNYLTDQLTSIMSKLNQEKSKMETTFTYMADGVLTVDKNGNIIHINPIAKKILSVRAK
DTIYDEIMSKHAQDLYLDNIKETNWSGTYVLKTKNETYKIDYAPFKDGNDELGGVILVFK
NVTEQVKMDKLQKEFVANVSHELKTPITTIKSYTETLLEGAIKEENVATDFLNVINSESD
RMTRLVRDLLKLSKMDFEEDNFKKEKLNINRIVKEVYMKLILQAKGKKIDMPLRLEDIDC
NVLFDKDGLEQILLNIIGNAIKYTPERGKVIVSVSLEKSKVVVKIEDNGIGIPKEDAGRV
FERFYRVDKARTRKLGGTGLGLSIAQQIAKAHDSIIEVKSEFNKGTTVQVKIPKYLK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagtataagatggagaattgtaataatctattttttgttaatctatcttgct
atgacaatagttggattttttataattactcagtttgaaaaaatacagcttgatatgaat
tcagatagtataaaacaacgtattacccaaatatatgcatcatctacagctatgaagcaa
aatgattgggaaatagaagaaataattgaaaagattcaaagcaatattaattatagtata
caaataggatataatgaaaatttatatattatattaaatgatgataaaaaaactatcatt
gcagctagtaaaaatgaggttgaaaatattagcgcatatgatgttgatagaataagcaat
aaaatcttagttgaagctttatcaggggtaactaccgaaacaataacaaaagatgacgaa
gacaatagagtagaaagccatataacatatcctgtaagaaatgaaatgaaccaaattaag
ggttatatatatttaacaagtgatatcagttatatttatgacactgtcaatgaatctaaa
actatgttaactaaagccactttaatggtcttactattaacagttatacttggattgata
ttgtcaagaacaataacaggtccaataaaagagttgacaattaatgctaaaaagatgtcg
caaggggattttgcacataaggtaaagattaagtcggatgatgaaataggacaactagga
gaagtatttaactatttaacggaccaattgactagtattatgtcaaaacttaatcaagaa
aaaagcaagatggagactacttttacctatatggctgatggagttttaacagtagataaa
aatggaaacataattcatataaatccaattgcaaagaaaatattatcagttagagctaaa
gatacaatatatgatgaaattatgtcaaaacatgcgcaagatttatatttagacaatatt
aaagaaactaattggagtggtacatatgtcttgaaaacaaaaaatgaaacatataaaata
gactatgctccatttaaagatggaaatgatgagttgggtggagttatattagtatttaaa
aatgttacagagcaagttaaaatggataaattgcaaaaggaatttgttgcaaatgtatca
catgaactgaaaacacctataactacaataaaaagttatacagaaacccttttagaaggt
gcaataaaagaagaaaatgttgcaactgatttcttgaatgttataaacagcgaaagtgat
agaatgacaaggctagttagagatttattaaaattgtctaaaatggattttgaggaagat
aacttcaaaaaagaaaaacttaacataaatagaattgttaaagaagtttatatgaagctt
attttacaagcaaaaggtaaaaagatagacatgcctttaaggctagaagatatagattgc
aatgttttatttgataaggatggattagaacaaatattattaaatatcataggcaatgca
ataaaatatactcctgaaagaggtaaagttattgtatcagtatctcttgaaaaaagtaaa
gttgtagtaaaaatagaagataatggaataggcataccaaaagaagatgctggacgtgtg
tttgagagattttatagagttgataaagcaagaactagaaaacttggggggacaggattg
ggattatctatagctcaacaaatagcaaaagctcatgatagtattattgaagttaaaagt
gagtttaacaagggtacaacagtacaagtaaaaatacctaagtatttaaaataa
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