Sedimentibacter sp. zth1: JYG23_10190
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Entry
JYG23_10190 CDS
T07110
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedz03032
]
JYG23_10190
03036 Chromosome and associated proteins [BR:
sedz03036
]
JYG23_10190
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_10190
DNA replication proteins [BR:
sedz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYG23_10190
Chromosome and associated proteins [BR:
sedz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JYG23_10190
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JYG23_10190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
HU-DNA_bdg
HTH_15
Motif
Other DBs
NCBI-ProteinID:
QSX05055
UniProt:
A0A974XA84
LinkDB
All DBs
Position
complement(2100335..2100613)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKAELIANIAEKTGFTKKDAERALNAMMDSIKDELVKGEKVQLVGFGTFEVRNRKERTG
RNPRNPKEEIAIPASKAPVFKAGKSLKEAVNE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagctgaattaattgctaatatagcagaaaaaactggatttactaagaaagat
gctgagagagctcttaacgctatgatggacagtataaaagatgagttagttaaaggcgaa
aaggttcaattagttggatttggaacttttgaagttagaaacagaaaagaaagaacagga
agaaatccaagaaatcctaaagaagaaattgcaatacctgcatcaaaagcaccagtattt
aaagctggtaagtctctaaaagaagctgtaaacgaataa
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