Sedimentibacter sp. zth1: JYG23_10285
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Entry
JYG23_10285 CDS
T07110
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JYG23_10285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedz03400
]
JYG23_10285
DNA repair and recombination proteins [BR:
sedz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JYG23_10285
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GFIT
Motif
Pfam:
MutS_V
AAA_21
MutS_III
AAA_14
T26-6p_Ig-like_dom_2
Gemini_AC4_5
Motif
Other DBs
NCBI-ProteinID:
QSX05074
UniProt:
A0A975AE92
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Position
complement(2121813..2123720)
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AA seq
635 aa
AA seq
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MNEHIFEKLEYNKLKDKVKECCVSSLGRDLIDKLEPTGNIKTVQNRLNETTEARALLDYS
GAVQLNGIVNIKEIITKVKKDMILDPEQLINVAAFLRGCGKIKTYMKDKEFYAPTLYSYS
FNLEDLNYLEEEIELSIKNNRLSDDATTELKKIRRHIAQLESKIDEELNKFLKNPNNSNF
IQDFFVTRRQGRLTVPIKSSYKNMVAGIVIESSGKTAFVEPNSVSKYTQKYTQLKIDESE
EEYKILSNLTSHVYDNLYTFERNIEVMSHYDMVFAKGKYSKAIGGIAPKLNNYGYTKIVN
GRHPLLEGNVVPLNVVIGDKYRSLVITGPNAGGKTIVLKTIGLLTLSMQSGFHIAVDDDT
DMSVFDRVFADIGDDQSLENSLSTFSAHVKNLSYILRQTNKSTLLLFDEIGSGTEPNEGA
ALAIAILEEVYSKGAITVATTHYNEIKNFSSSHPDFENAAMRFNKDTLEPMYRMIIGKSG
DSNALWISKKMGIYDDVLRKAEKYMKDKTYNLKIIDNGRKRIKKVKVIDEVKYNYETGDK
VFINEINDSAIVYKEKDEYNNVVVFCNNEFKTYNVKQLKLQYARKELYPEDYDLNTLFSS
YMERKVEKDIKRGSKKMLKRIHKYGYEKTINNKKH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcatatttttgaaaaattggaatataacaaattaaaagataaggtaaaagag
tgttgcgttagtagtttgggaagggatttaatagataaactagaaccaacaggcaatatt
aaaacagttcaaaatagactgaatgaaacgacagaagcaagagctttactggattattca
ggtgctgtacaactaaacggaatagtaaatataaaagaaataataactaaggttaaaaaa
gatatgattttagaccctgaacaattaataaatgtagcagcatttttaagaggttgcggt
aagattaaaacatatatgaaggataaagaattttatgcaccgactttgtatagctatagt
tttaatttagaggatcttaattacttagaagaagaaatagaattaagtataaaaaacaat
cgtttaagtgatgatgcaacgacagagttaaaaaaaataaggaggcacatagctcagctt
gaaagtaaaatagatgaggaacttaataaatttttgaaaaatccaaataatagtaatttt
attcaggacttttttgtaacacgaagacaaggaagattgactgttcctattaaatcatct
tataaaaacatggtagctggcatagtgattgaaagcagtggaaagactgcatttgttgag
ccgaattcagtaagcaaatatactcaaaagtatacacaattaaaaattgatgaatcagag
gaagaatacaaaatactgtccaatttgacttcacatgtatatgataatttgtatacgttt
gaaagaaatattgaagttatgtctcactatgacatggtgtttgctaaaggtaagtatagt
aaagcaattggtggaatagcaccaaaattaaataattatggatatacaaaaatagtaaat
ggaaggcatccacttttagaaggcaatgtagtaccactaaatgtagttataggtgataaa
tataggtcgcttgtaattacaggaccaaatgcaggtggaaagactatagtgcttaaaact
ataggattactaacactttctatgcaatcgggctttcatatagcagttgacgatgataca
gatatgtcagtttttgatagagtgtttgctgatataggcgatgaccaaagcttagaaaat
tcgctaagtactttctcggcgcatgtaaaaaatttatcgtatatattaagacaaaccaat
aagtcaacacttttgttatttgatgaaataggtagtggaactgagccaaatgagggtgca
gcacttgccatagcaatactcgaagaagtttatagcaaaggggctataacagttgcaact
acacattacaatgagattaaaaacttttcttctagtcatcccgattttgaaaatgcagct
atgagattcaacaaggatactttggaaccaatgtatcgaatgattataggtaaatcggga
gacagtaatgctttatggatatctaaaaaaatgggaatatacgatgacgtgctaagaaaa
gcagagaaatatatgaaagataaaacatataaccttaaaattattgataatggaagaaaa
agaataaaaaaagtaaaagtaattgatgaggttaaatataattatgaaactggagataaa
gtttttataaatgaaataaatgatagtgctatagtgtataaagaaaaggatgagtataat
aatgtagttgtattctgtaataatgaatttaaaacatataatgttaagcaactaaaattg
caatatgctagaaaagaactgtatccagaagattatgatttgaacacacttttctcaagc
tatatggaaagaaaagttgaaaaggatataaaacgaggttctaaaaaaatgttaaaaaga
attcataaatatgggtatgagaaaaccataaataataaaaaacattaa
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