Sedimentibacter sp. zth1: JYG23_11820
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Entry
JYG23_11820 CDS
T07110
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYG23_11820
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedz01007
]
JYG23_11820
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_11820
Enzymes [BR:
sedz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
JYG23_11820
Amino acid related enzymes [BR:
sedz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JYG23_11820
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JYG23_11820
Prokaryotic type
JYG23_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
Snapin_Pallidin
RUBY_RBDX
DUF7129
zf-C2HC5
DUF6487
DUF7130
DUF1664
ACBP4_C
DASH_Spc19
Zn_ribbon_8
NCD3G
Motif
Other DBs
NCBI-ProteinID:
QSX05357
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All DBs
Position
2468719..2471361
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AA seq
880 aa
AA seq
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MNTKYNPKDFEEKIYNTWLEEGCFKADVNEEKEPFTIVLPPPNITGQLHMGHALDHTLQD
VLIRWKRMQGFETLWLPGTDHASIATEVKVVEKIRKEEGKSKEDLGREEFLKRAWDWKEE
FGGRIIEQMEKLGDSCDWSKLRFTMDEGCNKAVTEVFCKLYEKGLIYKGNRMINWCPDCM
TTLSDAEVEHEDKPGKYYYVKYPYVDNKDEYFVVATTRPETIFGDTAIACHYDDERYKHL
IGRKVIVPLVGREIEIIGDEYPDISKGTGALKITPCHDPNDFEIGQRHNLESISCMNENG
TMNKVSGKYESMDRYECRKAFVKELEEKGFIEKIEDTSHNVGTCYRCHNIVEPRVSDQWF
VKMEELAKPALEAAAKKEVEFIPERFTKIYNNWLEGIRDWCISRQLWWGHRIPAYYCQDC
GEIMVSKHHPDKCTKCGSTNIKQDEDVLDTWFSSALWPFSTLGWPNKTKELDYFFPTDVL
ITGYDIIFFWVARMIFSSIEQMGEVPFKYVFMHGLVRDAEGRKMSKSLGNGVDPIEVIDQ
YGADALRFMLMTGISPGNDTRYKVEKLEACRNFANKLWNASRFVLMNLDGELADEKAAQE
NFRLEDKWIISRINTVVKEVTQNLDKFELGVAAQSVYDFIWNEYCDWYIEIVKPRLYGED
KLTKNVAKYTLIKVLKECLKLLHPFMPFITEEIWTNLPETSSRLIKAEWPKYNEAENFEI
AEKQMQFIMEAVTKIRNIRAEMNVAPSRKARAIFIPTNDTVKEYLVGSEVYFATLANITE
TSVAHDKADITEETATGVIEGTQIALPLADLIDFEKEIERLEKEKVKLQSELDRVNGKLS
NEKFMSKAPENVVAQERAKLTKYQEMMNAVTERLGHMKNK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaatataatccaaaagattttgaagaaaaaatttataacacatggcttgaa
gaaggttgcttcaaggcggatgtaaatgaagaaaaagagccatttacaatagtgcttcca
ccaccaaatattacaggtcagcttcacatgggtcatgctcttgaccatacattacaagat
gttttaattagatggaaaagaatgcaaggttttgaaactttatggttaccaggaacagat
cacgcaagtatagcaacagaagtaaaggtagtagaaaaaattagaaaagaagaaggcaag
tcaaaagaagatttaggaagagaagaatttttaaaaagagcttgggattggaaagaagag
tttggcggaagaattattgagcagatggaaaaacttggtgattcatgcgattggtcaaaa
ttaagatttacaatggacgaaggttgcaataaagcagtaacagaagtattttgtaaatta
tatgaaaaaggacttatatataaaggaaacagaatgataaattggtgtcctgattgtatg
actacattgtcggatgcagaggttgaacatgaagacaaaccaggtaaatactattatgtt
aaatatccgtatgtagacaataaagatgaatactttgtagttgctacaacaagacctgaa
actatattcggagatactgctatagcatgtcattatgatgatgaaagatataaacaccta
attggaagaaaagttatagttccgttagtaggtagagaaatagaaattataggtgatgag
tatcctgatatatctaaaggaactggagcacttaaaattacaccatgtcatgaccctaat
gactttgaaatcggtcaaagacacaaccttgaatcaatctcttgcatgaacgaaaacggt
actatgaataaagtatcaggcaaatacgagagtatggatagatatgaatgtagaaaagca
tttgtaaaggaactagaagaaaaaggatttatagaaaaaatagaagatacatcacacaat
gtaggaacatgttatagatgtcacaatatagttgaaccaagagtttcagaccaatggttt
gttaaaatggaagagcttgcaaaaccagctttagaagcagcagcaaaaaaagaggtagaa
tttatacctgagagattcacaaaaatctataataactggttagaaggaattagagactgg
tgtatttcaagacaattatggtggggacacagaattcctgcatattactgtcaggattgt
ggagaaataatggtttcaaaacatcaccctgataaatgtacaaaatgtggtagtacaaat
attaaacaagatgaagatgtactagatacttggtttagttcagctttatggcctttttca
actttaggatggccgaataaaactaaagaattggattatttcttcccaacagatgttttg
ataacaggctatgacataatattcttctgggtagctagaatgatattttcaagcatagag
caaatgggagaggttccatttaaatacgtatttatgcatggtttagttagagatgcagaa
ggaagaaaaatgtctaaatcgttaggcaatggggtagatccaattgaagtgatagatcaa
tatggtgctgatgcacttagatttatgctaatgacaggtatttcaccgggaaatgataca
agatacaaggtagaaaaacttgaagcatgcagaaactttgcaaataagctatggaatgca
tcaagatttgtactaatgaatttagatggtgaattggcagatgaaaaagctgctcaggaa
aatttcagacttgaagataaatggattatttcaagaattaacacagtggtaaaagaagtt
actcaaaacttagataaatttgagttgggagttgcagctcaaagcgtatatgattttata
tggaatgagtactgtgactggtatattgaaatagttaaacctagactttatggagaagat
aaattaactaaaaatgttgctaaatatacacttataaaggtattgaaggagtgtttaaaa
ttattacatccatttatgccatttataacagaagaaatttggactaatttacctgaaact
tcatcaagacttataaaagcagagtggcctaaatataacgaagctgaaaactttgaaatt
gctgaaaaacaaatgcagtttataatggaagcagtaacaaaaatcagaaacattagagct
gaaatgaatgttgctccatcaagaaaagcaagagctatatttattccaactaatgatact
gtaaaagaatatttagttggttcagaagtatactttgcaacattggcaaacataactgaa
acatctgtagctcatgacaaagctgatataacagaagaaacagcaacaggagttatagaa
ggaactcagatagcgttacctttagcagatttaatagattttgaaaaagaaatagaaaga
cttgaaaaagaaaaggtaaaattgcaatcagagcttgatagagttaatggaaagctttca
aatgagaaatttatgagtaaagcaccagaaaatgtagtagctcaggaaagagcaaagtta
acaaaataccaagaaatgatgaatgctgtaacagaaagattagggcatatgaaaaataaa
tag
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