Sedimentibacter sp. zth1: JYG23_12505
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Entry
JYG23_12505 CDS
T07110
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
sedz
Sedimentibacter sp. zth1
Pathway
sedz02020
Two-component system
sedz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYG23_12505
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYG23_12505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sedz02035
]
JYG23_12505
Bacterial motility proteins [BR:
sedz02035
]
Flagellar system
Chemotaxis proteins
MCPs
JYG23_12505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP_2
HAMP
4HB_MCP_1
TarH
Sec10_N
FERM_f0
Motif
Other DBs
NCBI-ProteinID:
QSX05488
UniProt:
A0A974X957
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All DBs
Position
2611930..2613678
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AA seq
582 aa
AA seq
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MFKNVKIGMRILYCFIFITLLVAGTMIITSIGTVTVANNLETFYEQSYNESNLAWSMKEK
LSIAESNMYKCALYNEKSIVKENIQIINEQMANVNKISLKLKSTDVYKNSEKLIKFDEII
KESEPLSKQILEDLQSNMKTRALKVINEQYIPLITEANQILDDIVCSSNTSAIDFVENSR
SFKNRQISILVLIVIIDILFIILTCITLTRSIVNPLSEIKNSIADMSKGKLNTKIKYNSK
NEVGQLAKNVNATLEALSAYISNISDILGNVSKGNITDSVEMDYIGDFKPIKDSLIEIID
SLNTTLIKINETAQLVTDESEQVSSGSMALSEGTIQQASSIQELSASISEVANKVNKNAE
NAKEASKMSEKTVIEVKNGYDLMQNMMEAMEDIRLASDQIQSIIKVIDNIAFQTNILALN
AAVEAARAGAAGKGFGVVAEEVRNLAAKSAESAKNTSLLIQNAIDAVEKGSQIAQNTSDS
LKLIVESTKESTKLINCISEASNEQSNVISQINEGVEQISAIVQTNSSTAEENAASSEEL
SAQAQTLKMMVSIFELKTRNTEFEEESASELKKDDLISSLMD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaatgttaaaatcggcatgcgtattttatattgctttatatttattacattg
ttagttgctggaacaatgattattacaagtataggtactgttacagttgctaataattta
gagactttttatgaacaatcgtataatgaaagtaatttggcatggagtatgaaagaaaaa
ttatccattgcagaatcaaatatgtataagtgcgctttgtataatgaaaaaagcattgta
aaagaaaatattcaaataataaatgagcaaatggcaaatgtaaataaaataagcttgaaa
ctaaaaagtactgatgtttataaaaatagtgaaaaactaattaaatttgatgagataata
aaagaaagcgaaccattaagcaaacaaatattagaagacttacaatctaatatgaaaaca
agagcattaaaagtaattaatgaacaatatattccattaattacagaagcaaatcaaata
ttagatgatatagtttgtagttctaatactagtgcaattgacttcgtggaaaattctcgt
agttttaaaaatagacaaattagtatattggtgctaatagtaataattgatatattattt
ataatattaacatgtataactttgacaagaagcatagttaatccactgtcagaaatcaaa
aattctatagctgatatgtcaaaaggaaaacttaatacaaaaattaagtataattcaaag
aatgaagttggtcagctagcaaaaaatgttaatgcaactttagaagcattgagtgcatac
atttcaaatatatcagatatactgggaaatgtatcaaaaggaaatataacagatagtgta
gaaatggattatattggagattttaagcctataaaagattcgttgatagaaataattgat
tccttaaatacaactttaattaaaataaatgagacagcccagctagtaacggatgagtca
gaacaggtttcaagtggttcaatggcattatcagaaggaacaatccaacaagcaagttct
atacaagaattatcagcatcaatatctgaagtagcaaataaggttaataaaaatgctgaa
aatgcaaaagaagcaagtaaaatgtcagaaaaaacagttatcgaagtaaaaaatggttat
gatttaatgcaaaatatgatggaagcaatggaagatatcagattagcttctgatcaaatc
caatcaataattaaggttatagataatatagcatttcaaacaaatatacttgcattaaat
gcagcagttgaagcagcaagagctggagcggctggaaaaggctttggagttgtagctgaa
gaagtaagaaatttggcagcaaaaagtgcagaatcggctaaaaatacttctttacttata
caaaatgctatagatgctgtagaaaaaggatctcaaatagctcaaaacacatctgattca
ctcaagctaatagtagaaagtacaaaagaatcaacaaaacttataaattgtatatcagag
gcttctaatgagcaatctaatgtcatatcacaaataaatgaaggcgtagagcaaatatca
gcaattgtacaaactaattcatctactgcagaagaaaatgctgcatcaagtgaagaatta
tctgcgcaggcacaaacattaaaaatgatggtatcgatttttgaattaaaaacaagaaat
actgaatttgaagaagaaagcgcatctgaattaaaaaaagatgatttgatatcatctcta
atggattaa
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