Sedimentibacter sp. zth1: JYG23_12670
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Entry
JYG23_12670 CDS
T07110
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sedz
Sedimentibacter sp. zth1
Brite
KEGG Orthology (KO) [BR:
sedz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedz03016
]
JYG23_12670 (truA)
Enzymes [BR:
sedz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JYG23_12670 (truA)
Transfer RNA biogenesis [BR:
sedz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JYG23_12670 (truA)
Prokaryotic type
JYG23_12670 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QSX05517
UniProt:
A0A974X983
LinkDB
All DBs
Position
complement(2650941..2651612)
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AA seq
223 aa
AA seq
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MRNIKMLIEFGCGRTDAGVHALNYTANFHTNSNMATEKMYDYLYKYLPDDIQVKSIKDCS
ERFHSRYNALNKTYLYKIYNSNYRNIFSRRFEYNAIEPLDIDKMLEASKFLVGTHDFQSF
TTLKSKKKSTIKTIYSIDILKKGNNIDIEINGNSFLWHMVRIIVGTLLEVGKGNIIPTDI
ERILNERKRQEAGPNAPAHGLFLKRLNINNKFREVFFYESITY
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatataaaaatgttaatagaatttggctgtggaagaactgatgctggtgttcat
gctctgaattatactgcgaattttcatactaattcaaatatggcaaccgaaaaaatgtat
gactacttatacaaatatttgcccgatgacatacaggttaaatctattaaagattgtagt
gaaagatttcattcaagatataatgctttaaataagacttatttatataaaatatataat
tcaaattatcgaaatatatttagtagaaggtttgaatataatgcaatagaacctttagat
attgataaaatgttagaagctagtaaatttcttgtaggtacacatgattttcagagcttt
actacattgaaatctaagaaaaaatctactataaaaactatatactccatagatatatta
aaaaaaggtaataatatagacattgaaattaatgggaattcatttttatggcatatggtt
agaataatagttggaacacttttagaggtaggtaaaggaaatataattcctacagatatt
gaaagaattttaaatgagcgtaaaaggcaagaagctggtccaaatgctcctgcacatgga
ttatttttaaaaaggttgaatattaataataaatttagagaggtgtttttttatgaaagt
attacttattaa
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