Salmonella enterica subsp. enterica serovar Newport SL254: SNSL254_A0862
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Entry
SNSL254_A0862 CDS
T00739
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
see
Salmonella enterica subsp. enterica serovar Newport SL254
Pathway
see03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
see00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNSL254_A0862 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
see03400
]
SNSL254_A0862 (uvrB)
DNA repair and recombination proteins [BR:
see03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNSL254_A0862 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNSL254_A0862 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
IF2_N
AAA_22
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
ACF63970
UniProt:
B4SZK1
LinkDB
All DBs
Position
868785..870806
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPR
YTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGKGKGRSTAKAGIVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggacgct
atacgtcgtctggaagaggggctggaggacgggctggcgcatcagacgttattgggcgtg
accggctccgggaagacattcaccattgccaacgtcattgcggacttgcagcggccaacg
atggtgcttgcgcccaataaaaccctggcggcgcagctctacggcgaaatgaaagagttt
ttcccggaaaacgcggtggagtatttcgtctcctactatgactactatcagccggaagcg
tatgtgccaagttcggatacgtttatcgaaaaagacgcttcggtaaacgaacatattgag
caaatgcggttgtcggcaacgaaagcgttgcttgagcgacgcgatgtcgtggtggtggct
tccgtgtccgcgatttacggtctgggcgatccggatctctacctgaaaatgatgctgcat
ctgacggtgggaatgctgattgaccagcgcgcgattttgcgtcggctggcggaattgcaa
tacacccgtaacgatcaagcttttcagcgtggtacctttcgcgtgcgcggcgaagtgatc
gacatcttcccggctgaatctgacgacatcgcgctacgcgttgagctgtttgatgaagaa
gtggaacgcctgtcgctgttcgacccgttaaccgggcaggtagagtcaacggtgccacgt
tatactatctatcccaaaacgcactacgtgacgccgcgcgagcgtattctgcaggcgatg
gaagagataaaagatgagctggcggacaggcgtaaggtcttgctggcaaataataagctg
cttgaagagcagcgattaagccagcgcacgcagttcgatttagagatgatgaacgagctg
ggctactgctcaggcattgaaaactattcccgctttctgtcgggccgcgggccgggcgaa
ccgccgccaaccttgttcgattatctgcccgccgacggactgctggtggtggatgagtct
catgtcaccatcccgcagataggcggcatgtaccgcggcgaccgggcgcgcaaagagacg
ctggtcgagtatggcttccgtctgccttcggcgctggataaccgtccgctgaagtttgag
gagtttgaagccttagcgccgcaaactatctatgtttccgccacgcccggcaactatgag
ctggaaaaatctggtgatgaggtggtggatcaggtcgtgcgaccgaccgggctgctggac
ccgattattgaagtgcgtccggtggcgacccaggtggacgatctgctgtccgaaattcgt
cagcgtgcggccattaatgagcgtgtccttgtcactacgcttaccaaacggatggcggaa
gatttgaccgaatatctggaagagcacggcgagcgcgtgcgttacctgcactcagatatt
gataccgtggagcgcatggaaatcatccgcgatttgcgtctgggcgagtttgacgttctg
gtggggattaacctgctgcgcgaagggctggatatgccggaagtctcgctggtggcgatt
ctggacgccgataaagagggcttcctgcgctccgagcgctccctgattcagaccataggg
cgcgcggcgcgtaacgttaacggtaaagcgattctgtatggcgataaaatcacgccgtcg
atggcgaaggcgattggcgaaaccgagcgacgtcgcgagaagcagcagaagtacaacgaa
gagcacggtatcactccgcaggggctgaacaaaaaagtggtcgacatcctggcgctgggg
cagaacattgcgaaaaccaaagcgaaggggaaaggcaagggccgttctacggcaaaagcc
ggaattgtcgaactggatatgacgccgaaagcgttgcagcagaaaattcatgaactggaa
gggcaaatgatgcagcacgcgcaaaatctggagtttgaagaagccgcgcaaattcgcgac
cagttgcaccagttacgcgagttgtttatcgcggcgtcctga
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integrated database retrieval system
