Salmonella enterica subsp. enterica serovar Newport SL254: SNSL254_A3220
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Entry
SNSL254_A3220 CDS
T00739
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
see
Salmonella enterica subsp. enterica serovar Newport SL254
Pathway
see03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
see00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SNSL254_A3220 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
see03400
]
SNSL254_A3220 (recB)
Enzymes [BR:
see01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SNSL254_A3220 (recB)
DNA repair and recombination proteins [BR:
see03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SNSL254_A3220 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACF63680
UniProt:
A0A0H3BTM0
LinkDB
All DBs
Position
complement(3130446..3133991)
Genome browser
AA seq
1181 aa
AA seq
DB search
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDTFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESVALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHNLFE
ELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQTAMAAAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgagactcttgatcctctgcgcttgccccttacaggcgagcgtttg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggtta
ttgctcggcctgggcggcagtgccgcatttccccgcccgttgaccgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgaatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctttatgcccgcttg
ctggaagaaattagcgacaaaaagcaggccgcacagtggttattactggcggaacgacaa
atggacgaggccgcggtttttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaagttcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtggct
caggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacagcagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatctttacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacccttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaatgacacctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggagaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacacaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgtgcctcggatatcagcgtgctggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggaaatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctctggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgtcgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggc
gaacgtcggctgacggatattttgcatattagcgagctgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcagcatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcgtagcactggcggaagccgagcgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgctgtgtggcattgcagcctcggcgtcgcgccgctg
gtacggcgtcgcagcgataagaaaggcgagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaaatt
gccgctgcctcgcacgcggaactcagtgccagaacgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacaacctgtttgaa
gagcttgattttactcaaccgataaacccccaatgggtacaggaaaaactggagctgagt
ggttttgagacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcggtacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtgttccgttatgaggggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccagacggcgatggctgcg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcaccgt
taccttcgtcatcgaatggcgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgccct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
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