Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_003265
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Entry
SEEB0189_003265 CDS
T02739
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Pathway
seeb02020
Two-component system
seeb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SEEB0189_003265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SEEB0189_003265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seeb03021
]
SEEB0189_003265
Transcription machinery [BR:
seeb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SEEB0189_003265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AGQ57835
UniProt:
A0A4D6P0P2
LinkDB
All DBs
Position
complement(607806..609239)
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDEIRESMGDVEVDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaggaactccagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacactcagcaa
cctcaggataacgatcctctcgataccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgacgccagttgggatgaaatttacaccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgagctgcccgtctatcagggcgaaacgacgcagtcgttg
caggattatctgatgtggcaggttgagctaacgcccttctcggataccgatcgcgctatt
gcgacatccattgtcgacgcggtagatgataccggctatctcaccgtatccctggacgaa
attcgcgaaagcatgggcgatgtagaggtggatctcgatgaggttgaagccgtcctgaag
cgcattcagcgttttgatccggtaggcgtcgcggcaaaagatcttcgcgactgtctgctg
atccagctttcacaattcgacaaatccacgccgtggctggaagaggcgcggcttattatc
tgcgatcaccttgatctgctggccaaccacgatttccgcacgttgatgcgcgttacccga
ctaaaagaagaggtgctgaaagaggcggtaaacctgattcagtcgctcgatcccagaccc
ggtcaatcgatccagaccggcgagccggagtacgttatcccggatgtgctggtacgcaag
cataacggtcgctggacggtggagcttaatagcgacagtattccccgtttacagattaac
cagcactatgccgccatgtgcaatagcgcgcgcaacgatgccgacagccagttcatccgc
agtaatttacaggatgcgaaatggctgataaaaagccttgaaagccgcaacgacacgctg
ctgcgcgtcagtcgctgcatcgtcgagcaacagcaagccttttttgaacagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccact
atatcccgcgtgaccacgcagaagtatttgcacagcccgcgcggtatttttgaactcaaa
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgcgatt
cgcgcgctggtgaagaagttaattgcggcggaaaaccccgcgaaaccactgagcgacagc
aagttaacctctctgctgtcagaacaaggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
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