Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_004680
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Entry
SEEB0189_004680 CDS
T02739
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Pathway
seeb03410
Base excision repair
seeb03430
Mismatch repair
seeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SEEB0189_004680
03430 Mismatch repair
SEEB0189_004680
03440 Homologous recombination
SEEB0189_004680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seeb03400
]
SEEB0189_004680
DNA repair and recombination proteins [BR:
seeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SEEB0189_004680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SEEB0189_004680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SEEB0189_004680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGQ58068
UniProt:
A0A4D6P352
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All DBs
Position
889238..890971
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AA seq
577 aa
AA seq
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MKQQRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPE
VVDQAKARGAQLIVTVDNGISSYAGVAHAKTLGISVIVTDHHLPGDTLPDAEAIINPNLR
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGIAPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
DLMIKFGGHAMAAGLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSME
VAQLLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTT
CWPDNGVREVELAYKLDINEFRGNRSLQIIIDDIWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagagacaacttcgtcggcgcgaggctgatgagacggcggaactccccgcc
gatcttcctccattactacgacgtctatatgccagccggggcgttcgtagcgcccgcgaa
ctggagcgcagcgtgaaaggaatgctgccctggcaacagcttagcggcatagataacgcg
gtggagatcctctacaacgcctttcgcgaaggtacccgcattattgttgttggcgatttt
gacgccgacggcgcgaccagtactgcgctaagcgtattgggaatgcgtgcgttgggatgt
gacaacatcagttatctggtgcctaatcgctttgaagacggctacggtttaagcccggaa
gtggtcgatcaggcgaaggcgcgcggcgcgcagcttatcgtcaccgtagacaacggcatc
tcatcctacgccggcgtagcgcatgcaaagacgttggggatttcggtgatcgtgaccgat
caccacctgcctggcgacacgttgccggatgccgaagcgattattaatcccaatctgcgc
gactgcgaattcccgtctaagtcgctggcgggcgtcggcgtggcgttttacctgatgctg
gcgttgcgaacatttttgcgcgacaaaggatggttcgacgagcgtggcatcgcgccgccg
aatctggcggagctgctggatttagtggcgttgggaacggtagcagacgttgtgccgctg
gacgccaacaaccgtattctgacctggcaagggctaagtcgtattcgtgccgggaaatgc
cgtccgggaattaaagcgttgctggagatatcgaatcgcgatccgcagcagcttgccgcc
agtgatttaggcttcgcgttggggcctcgcctgaatgccgccggcaggctggatgatatg
tccgttggcgtggcgttactgttgtgcgacaacctcggcgaagcgcgtgttctggccagc
gagctggatgcgcttaaccagacgcgcaaagaaatagagcaggggatgcaggcggaagcg
cttatcctgtgcgaaaagcttgagcgcagtagtgaaacgcttccgggcggtctggcgatg
tatcatcctgaatggcatcagggcgtggtcggaattctggcgtcgcgcattaaagagcgt
tttcaccgcccggtgatcgcctttgcgcctgcgggcgacggcacgctaaaaggctcaggt
cgttcgattcaggggctgcatatgcgcgatgcgctggaaaggctggataccctttaccct
gatctgatgatcaagttcggcggtcatgcgatggcggcgggattgtcgctggaagagcat
aaattcgagcagtttcagcaacgttttggcgagctggtgacggaatggctcgatcctgcc
ctgttgcaaggcgaggtgatctccgatggtccattaagcgcggcggagatgtctatggaa
gtggcgcaactgttgcgggatgccggaccgtgggggcaaatgttcccggaaccgttattc
gatggtcgtttccgtctgctacagcagcgtctggtgggcgagcgccacctcaaggtgatg
gtggagcccgtcggcggcggcccgctgttggatggcatcgcatttaatattgatacgacc
tgttggccggataacggcgtgcgggaggtagaactggcttataaactggacattaacgag
tttcgcggcaaccgtagtttacagattattatcgatgatatttggccgctatga
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