Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_020100
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Entry
SEEB0189_020100 CDS
T02739
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seeb03000
]
SEEB0189_020100 (treR)
Transcription factors [BR:
seeb03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SEEB0189_020100 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
MarR
HTH_Crp_2
CENP-B_N
HTH_26
TrmB
HHH
HTH_28
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AGQ60470
UniProt:
A0A4D6PB94
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All DBs
Position
4132762..4133709
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNID
GVVLFGFTGITEELISPWKASLVLLARDAQGFASVCYDDEGAIHILMQRLYEQGHRNISF
LGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCAT
DTLALGASKYLQEQRIETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAASQLIEQIN
GRCDPRRIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctcactatcaaagacatcgcccgcctgagcggcgtagggaaatcaacc
gtttcccgcgtgcttaacaatgaaagcggcgtaagcgaacgtacccgcgagcgtgtcgaa
gcggtgatgaatcaacacggtttctctccgtcccgctccgcccgcgcgatgcgaggacaa
agcgataaagtggtcgctattatcgtcactcgccttgattcgttgtctgaaaacctcgcg
gttcagaccatgctgcctgcgttttatgaacagggctacgaccctattatgatggaaagt
cagttctcgccgacgctggtaatggaacatctgggcatgctcagacgacgtaacattgat
ggcgtggtgctgtttggctttaccggcatcacagaagagttgatctccccctggaaagct
tcgctggtgctgctggcaagagatgcgcaaggttttgcctccgtctgttacgacgacgag
ggcgcgattcatatccttatgcagcggctgtatgagcagggacaccgcaacattagcttt
ctgggcgttccccatagcgatattaccaccggcaaacgtcggcatgacgcatacctggcg
ttttgcaaaaaacataaacttcatcccgtcgccgccctgcccggtcttgccatgaagcag
ggctatgagcatacggcaagcgtcatcatgccggataccaccgcgttagtctgcgccacc
gatacgctggcgttgggcgccagtaagtatttacaggagcaacgtattgagacgctgcaa
ctggcaagcgtcgggaacacgccgctgataaaattcctgcacccggagatcgtcactgtc
gatcctggctatgctgaagccggacgacaggcggcttcgcagctgatcgaacagatcaat
ggccgctgcgatccgcgccggatcgtcattccttctaccctcgcctga
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