Salmonella enterica subsp. enterica serovar Bareilly: SEEB0189_022605
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Entry
SEEB0189_022605 CDS
T02739
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
seeb
Salmonella enterica subsp. enterica serovar Bareilly
Pathway
seeb00300
Lysine biosynthesis
seeb00470
D-Amino acid metabolism
seeb01100
Metabolic pathways
seeb01110
Biosynthesis of secondary metabolites
seeb01120
Microbial metabolism in diverse environments
seeb01230
Biosynthesis of amino acids
Module
seeb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
seeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SEEB0189_022605 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SEEB0189_022605 (dapF)
Enzymes [BR:
seeb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SEEB0189_022605 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AGQ60844
UniProt:
A0A4D6PCY9
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All DBs
Position
complement(4672244..4673068)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggggag
ccaaactttgaacccgcgcaggtcccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatactatgcggcgtggtttcaatgggcaatccgcactgt
gttattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgtgag
catatccggctgcgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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