Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_02070
Help
Entry
CFSAN002050_02070 CDS
T02734
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seec03032
]
CFSAN002050_02070 (gyrB)
03400 DNA repair and recombination proteins [BR:
seec03400
]
CFSAN002050_02070 (gyrB)
Enzymes [BR:
seec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFSAN002050_02070 (gyrB)
DNA replication proteins [BR:
seec03032
]
Prokaryotic type
DNA Topoisomerases
CFSAN002050_02070 (gyrB)
DNA repair and recombination proteins [BR:
seec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFSAN002050_02070 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AGQ71334
LinkDB
All DBs
Position
complement(107470..109884)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDGKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFDVHTNTEQNLF
EPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALEWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcaggtcactgtaaagatatcgtc
gtgactattcacgccgataactccgtgtccgtaacggatgatggccgtggcattccgacc
gggattcacccggaagaaggcgtctcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaatttgatgataactcctataaagtctccggcggtctgcacggcgtgggcgtc
tcggtagtcaacgctctgtcgcaaaaactggaactggttatccagcgagatggcaaaatt
caccgtcagatctacgagcacggcgtgccgcaggcacccctggccgtcactggcgatacc
gataaaaccggcacgatggtacgtttctggccgagccacgaaaccttcaccaacgtcact
gaatttgaatatgagatcctggcgaaacgcctgcgtgaactgtcattcctgaactcaggc
gtctccatccgcctgcgcgacaagcgcgatggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgaatatctcaacaagaataaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtatcggcgtcgaagtagcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtact
cacctggcaggcttccgtgcggcgatgacccgtacgctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggcgacgatgcccgtgaaggtctgatt
gcggtggtttccgtgaaggtgccggacccgaaattctcctcacagaccaaagataagctg
gtctcttccgaggtgaaatcggcggtagaacagcagatgaacgaactgctgagcgaatac
ctgctggaaaacccatctgacgcgaaaattgtcgtcggcaaaattatcgacgccgcgcgt
gcgcgtgaagcggcgcgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctggattta
gccggtctgccgggcaaactggcggactgtcaggaacgcgacccggcgctgtccgaactg
tacctggtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaaaggtaaaatcctcaacgtcgagaaagcgcgcttcgacaag
atgctctcctctcaggaagtggcgacgctgattaccgcgctgggctgcggtatcggtcgc
gacgagtacaacccggacaagctgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgtcgagcgcggccacgtctacattgcgcagccgccgctgtacaaagtcaagaaaggt
aagcaggaacagtacatcaaagacgatgaagcgatggatcagtaccagatttccatcgcg
cttgacggtgcgactctgcacgcgaacgcccatgcgccggcgctatccggcgaagcgtta
gaaaaactggtctctgaatataacgccacgcagaaaatgattggtcgtatggagcgtcgc
ttcccgaaagcgctgctcaaagagctggtgtatcagccaactctgaccgaagccgatctt
tctgatgagcagactgtaacgcgctgggtgaatgcgctgattaccgagctgaatgagaaa
gagcagcacggcagtcagtggaagttcgatgttcatactaatacggaacagaatctgttc
gagccgatcgttcgcgtgcgtacgcatggcgtggataccgattatccgttggatcacgag
tttgtgaccggcgcggaatatcgtcgtatctgcacgctgggcgagaagctgcgcggtctg
attgaagaggacgcgtttatcgaacgcggcgagcgtcgccagccggtaaccagcttcgag
caggcgctggagtggctggtgaaagaatcacgtcgcggtctggctatccagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaccgtcaaagatgcgattgctgccgaccagctgttcaccacgctg
atgggtgatgccgttgagccgcgtcgtgcctttatcgaagaaaacgccctgaaagcggcg
aacatcgatatttaa
DBGET
integrated database retrieval system