KEGG   Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_02455
Entry
CFSAN002050_02455 CDS       T02734                                 
Name
(GenBank) RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
seec  Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:seec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFSAN002050_02455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seec03019]
    CFSAN002050_02455
Enzymes [BR:seec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CFSAN002050_02455
Messenger RNA biogenesis [BR:seec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CFSAN002050_02455
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AGQ71394
LinkDB
Position
complement(190472..191737)
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRARPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccacaggtg
gttgaagcccttgaaaaaaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtcaacgtttcattatttactttctcatcccgcgatcgacgatcgc
aaggtgaaccagccgcgcgcgctgatcatggcgccgacgcgtgaattagccgtacaaatt
cacgcagacgcggagccgttggcgcaagcgacaggcttaaaattaggcctggcttacggc
ggcgatggttacgacaagcagcttaaagtgctggaaagcggcgttgatattcttattggt
acgacgggccgactgatcgactacgccaaacaaaatcacattaacctcggcgccattcag
gttgtcgtactcgatgaagccgatcgcatgtacgatttgggctttattaaagatatccgc
tggctgttccgtcgtatgccgccggctgcgcagcgtctgaacatgttgttctccgccacc
ctgtcttatcgggttcgcgagctggcgtttgaacagatgaacaacgccgaatatgttgaa
gtggaaccggagcaaaagaccggccaccgcattaaagaagagcttttctacccctctaat
gaagagaaaatgcgtttactgcaaacgctgatcgaagaagagtggccggatcgcgccatt
attttcgccaacaccaagcatcgttgcgaagatatctggggacatctggcggcagatggc
catcgtgttggtctgctgaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gagttcacccgcggcgatctggatattcttgtggcgaccgatgtcgcggcgcgcgggttg
catatccccgccgtaacgcatgtctttaactacgatctgccagacgattgtgaagactat
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcgggcattccatcagcctggct
tgcgaagagtatgcgctgaatctgcccgccattgagagctatatcggccactcgattccg
gtcagcaaatacaatccggaagcgctcatgaacgatctgcccaagccgttgcgcctgacg
cgtgcgcgtcctggcaatggtccgcgccgcgctggcgctccgcgtaatcgtcgtcgttca
ggttaa

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