Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_02670
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Entry
CFSAN002050_02670 CDS
T02734
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFSAN002050_02670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seec03019
]
CFSAN002050_02670
03400 DNA repair and recombination proteins [BR:
seec03400
]
CFSAN002050_02670
Enzymes [BR:
seec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFSAN002050_02670
Messenger RNA biogenesis [BR:
seec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFSAN002050_02670
DNA repair and recombination proteins [BR:
seec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFSAN002050_02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AGQ71426
LinkDB
All DBs
Position
230273..232120
Genome browser
AA seq
615 aa
AA seq
DB search
MVNGVNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKS
LCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTG
QIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPA
LPFMALTATADDTTRQDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQ
RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATV
AFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEE
KPAGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLN
DAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIR
QLIHLGLVMQNIAQHSALQLTDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNYDRK
LFAKLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKE
FMALIRAHVDGDDEE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacggggttaatgtggcgcaggcggaagtgttgaatctggaatcaggggccaaa
caggttttgcaggaaacctttggctaccaacagtttcgcccgggccaggaagcgattatt
gatactgcgctctccggtcgcgactgtctggtcgtcatgcccaccggcggcggcaaatct
ctgtgctatcaaatccccgcgttgttgctggatggattgaccgtcgtcgtttcgcccttg
atctcgttgatgaaagaccaggtcgatcagctactggcgaacggggtggcggcggcgtgc
ctgaactccactcaaagccgcgagcagcagcttgaggtgatggcggggtgccgtaccgga
cagattcgtctgctgtatattgcgccggaacgcctgatgctggacaactttcttgatcat
ctggcgcactggaatccggtattgctggcggtggatgaagcgcactgtatctcgcagtgg
ggtcatgatttccgtccggaatatgcggctctcggtcagcttcgccagcgttttcccgct
ttgccgtttatggcattgaccgccaccgccgacgacaccacgcgccaggatattattcgt
ctgcttgggcttaacgatccgttaatccagatcagtagctttgaccgaccgaatatccgc
tacatgctgatggagaagtttaagccgctcgaccagctaatgcgctatgttcaggagcaa
cgcggcaaatcgggtatcatctactgcaacagtcgggcgaaagtggaagataccgccgcg
cgcttgcaaagtcgcggcattagcgcggcggcctatcatgcggggctggaaaacgctatt
cgcgccgatgtgcaggaaaaatttcagcgcgacgatctgcaaatcgtggtggcgaccgtc
gcttttggaatgggcataaacaaacctaacgtacgtttcgtcgtgcatttcgatatcccg
cgcaatattgaatcctactatcaggaaacgggccgcgccgggcgcgacggattgcctgcg
gaagccatgctattttacgatccggctgacatggcctggctacgtcgttgtctggaagag
aaaccagccggacagcttcaggatattgaacggcataaactgaatgcgatgggcgctttt
gccgaagcgcaaacctgccgccgcctggtattacttaattactttggcgaaggccgacaa
gaaccgtgcggcaactgcgatatctgtctcgatccgcccaaacaatatgatggcttaaac
gatgctcagattgcgctttctaccattggtcgggttaaccagcgttttggcatgggctac
gttgtcgaggtgatccgcggcgcgaataaccaacgcatccgcgatttcggtcatgacaaa
ctcaaggtttatggcatgggacgcgaaaagagccatgagcactgggtgagcgtgattcgc
cagctcattcatctggggctggtaatgcaaaatattgcgcagcactccgcattacagttg
acggatgccgcgcgtccggtactccgtggagacgttccgctaaagcttgcggtgccgcgc
attgtcgccctcaaaccccgcgtgatgcagaaatcgttcggcggtaattacgatcgcaaa
ttgttcgctaagttgcgcaagctgcgtaaagctatcgctgatgaagagaatatcccgccg
tatgtggtctttaacgacgccacgttgatagagatggcggaacagatgccggtttccgcc
agcgagatgttaagcgttaacggggttgggatgcgcaaactggagcgcttcgggaaagaa
ttcatggcgctcatccgcgcgcatgtcgatggtgatgacgaagagtag
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