Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_14970
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Entry
CFSAN002050_14970 CDS
T02734
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Pathway
seec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFSAN002050_14970
Enzymes [BR:
seec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CFSAN002050_14970
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AGQ73292
LinkDB
All DBs
Position
2771709..2773700
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AA seq
663 aa
AA seq
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MVRMMKQIQEQKALNPLHSHWRLADDRNVLYLSPTGETDAEKTVELSPEQAGRIREITAI
TSSLLITLLIEKQVTAVHLVGCKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEA
NSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNG
NAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRTQERLRILANTD
TVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL
LSCLEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGI
SLAPRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALEND
QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQIAKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIEND
TLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTK
KMR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggtacgcatgatgaaacagattcaggaacaaaaggcgctaaatccccttcactctcac
tggcgtctggctgatgaccgcaacgtgctgtatctctccccgacaggtgaaacggatgca
gaaaaaacggttgagctatcgccggaacaagccgggcgtatccgggaaataacggcgatt
acgtccagtctgctgataacgttgttgatagaaaaacaggttaccgctgtgcacctggta
ggctgtaagattaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcct
gccgtcgcgccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagcc
aactcagtcattgcgatactggatagtcggggaaaaatctgtcgatttaatcggttatgc
gaagagtacacaggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattattt
atgagtcgccgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggc
aatgcctatgaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttattt
cgtaataaattcgtccataacggtagcggaaaaaacgaaattttcctgatctgcgcaggc
acggatatcaccgaagaaaggcggactcaggagcgtttacgcatactggcgaatacagac
accgtcaccggcctgcccaatcgcaatgctattcatgaatttattaatcatgctattgcc
tcggctggcgagtcgcaggtgggtatcgtttatctcgatctggataacttcaagaaaatt
aatgacgcctatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctg
ttgagttgtctggaggaagatcaattgctggccagactggggggagatgaattcattgtc
ctcgctgcccatacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgt
ctgcggcaaccgtttcgcattggactcattgaagtttacacgggatgcgccattggcatt
tcgttggccccccggcacggacaggacagcgaaagtctcattcgcactgccgacaccgca
atgtataacgccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaat
cagcgcgtatttgactatcactggctggatacaaacctgcgaaaagcgctggaaaacgac
cagttacttattcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaa
gcgctggtacgttggcaatcgccggaacgcggattaattccgccgctggagttcatctca
tacgccgaagagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtagtt
cgccagattgcgaaatggcgcgataaggggattaacttgcgcgtagccgttaacttttcg
gcgcgacaactggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctg
aattttgagtattgcccaatcgatgtcgagctaacggaaagctgcctgatcgaaaacgac
acgctggcgctatcggttatccagcaatttagtcagctcggcgcccagattcatctggat
gattttggcacagggtattcttcgctttctcaactcgcccggttccctattgatgccgtt
aaactggatcaggctttcgtcagagatatccataagcaaccgctgtcgcaatctctggtt
cgggcgattgtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggtgtagaa
aatgctaaagaagatgccttcctgacaaaaaacggtgtcaatgaacgacagggcttttta
ttcgctaaacctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaa
aaaatgcgttaa
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