Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_23845
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Entry
CFSAN002050_23845 CDS
T02734
Name
(GenBank) regulatory protein
KO
K18765
RNase E specificity factor CsrD
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seec03019
]
CFSAN002050_23845
Messenger RNA biogenesis [BR:
seec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFSAN002050_23845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
AGQ74611
LinkDB
All DBs
Position
complement(4601345..4603285)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAVQYKYVSRVQATATAIDTHLVTHDIVS
LTPQIDELMIASDIVRVDLLQGERSVYSHSRARGYRPAGTSDMYRELVVPLIKHPGMSLR
LVYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQRQLSGQELLEIRSTRILNGER
GANVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDTLIRSYAAQDTKTGLGNRLFFDN
QLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGNQAEEQMFMLINLLSTFIMRYPGSL
LARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDALPANKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAAARNAALQGGNSWAIYDDTLPEKGRGNVRWRTLIEQMLNRGGPRLYQKPAV
TREGRVHHRELMCRIYDGKEEVSSAEYMPMVLQFGLSEEYDRLQISRLITLLGYWPDENL
AMQLTVESLIRPRFQRWLRDTLMQCEKSQRNRIIIELAEADVCQHISRLQPILRLVNALG
VRVAVTQAGLTLVSTSWIKALNVELLKLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQV
YATGVRSRGEWQTLTKRGVAGGQGDFFASSQLLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttatcacgctgctcacggggttaacgatcttc
gtgactctgataggttgctcgctaagcttttataacgccgtacagtataagtatgtcagc
cgtgtgcaggcgacggcgacagccattgatacgcatctggtgacccatgatattgtctcg
ctgacgccgcaaatcgacgagctcatgatcgcttccgatattgtgcgtgtcgatctgttg
cagggggagcgcagcgtctacagccattctcgcgccagaggttatcggccagccggcacc
agcgacatgtatcgcgagctggtcgtaccgctgataaaacatccaggaatgtcgctacgt
ctggtttatcaggacccgatgggtaactattttcactcactgatcaccacggcgccgctg
acgctggcgatcggttttatcgttctgattttgtttttatcggtgcgctggctgcagcgg
cagctttccgggcaagagcttctggaaattcgctccacgcgtattctgaacggcgaacgc
ggggcgaatgtccgcggttctgtttacgaatggccagcgcgcaccagtagcgcgcttgat
gtattgctttccgaaattcagtttgctcacgaacagcgtagtcgcctggacaccctcatt
cgctcctacgccgcgcaggacaccaaaaccggactcggtaaccgtctgttctttgataac
caactggcgacgctgctggaagatcaggaaaaagtgggagtgcatggcgtggtgatgatg
atccgcttgccagatttcaatcttctgcgcgacagcctgggaggcaatcaggcggaagag
cagatgtttatgcttatcaatctgctatcgacatttattatgcgttacccaggctcgctg
ctggcgcgttatcaccgcagcgactttgccgtgctgctaccgcatcgaacgctgaaagaa
gcggaaagtattgccggacaacttttaaaagctgtcgatgcgctaccggctaacaaaatg
ctcgatcgtgacgatatggtacatatcggcatttgcgcctggcgcagcggacagtccacc
gagcaggtgatggaacatgctgaagccgcggcgcggaatgccgccctgcaggggggaaat
agctgggctatttacgacgacactctgccggaaaaagggcgcggcaatgtgcgctggcgc
acattgattgagcagatgctgaaccggggcggaccgcgactttatcaaaaaccagcggtc
acgcgagagggtcgcgtacatcatcgggaattgatgtgtcgcatctatgacggtaaagaa
gaggtgagctcggcggagtatatgccaatggtgttgcaatttggtttatcggaagagtat
gacagattacaaattagccgcctgattacgttgctgggctactggccggatgaaaatctg
gcaatgcagttgacggttgagtcgctgattcgtccgcgttttcagcgctggttgcgcgat
acgttaatgcagtgtgaaaaatcacagcgaaatcgcataattattgaacttgcggaggca
gatgtttgtcaacacatcagccggttacaacccatccttcgcttagtcaatgcgcttggc
gttcgggtggcggtgacacaggcgggtttgacgctggttagcacgagctggattaaagcg
ctcaatgtggaattactcaagctgcatccgagtctggtcagaaacattgagaagcgaacg
gaaaaccagcttctggttcaaagtctggtagaggcctgcgcgggcacgcctacgcaggtt
tacgcgacgggcgtccgttcgcgcggcgagtggcagacgctgacaaaacgcggcgtggct
ggcgggcagggtgatttttttgcctcctcccaactacttgacacaaacgtgaaaaaatat
tcgcaaagatactcggtttaa
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