Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_00845
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Entry
SEEH1578_00845 CDS
T02736
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seeh03009
]
SEEH1578_00845 (rumA)
Enzymes [BR:
seeh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SEEH1578_00845 (rumA)
Ribosome biogenesis [BR:
seeh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SEEH1578_00845 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_11
TRM5-TYW2_MTfase
RrnaAD
MTS
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_4
FtsJ
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AGQ61778
LinkDB
All DBs
Position
complement(42739..44034)
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AA seq
431 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQ
FARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDII
AGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLA
SLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILET
VSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFT
LPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVL
LDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTG
HLESMVLFERM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgcgtgacgacgcgtcagatcataaccgttaaa
gtcaatgacctcgattcatttggtcagggcgtagcccgtcataacggaaaggcgctgttt
atccccggtttattgcctgaggaaagcgcagaagtcattattacagaagataaaaagcaa
tttgcccgcgcacgcgtttcgcgccgtttgaatgatagcccggaacgagaaacgccgcgc
tgcccgcattttggcgtctgcggcggttgtcagcaacagcatgtcagcatcgccctgcaa
caacgcagcaaaagcgcggcgctggcgcgtttgatgaaacacgaggtgaatgacatcatc
gccggcgcgccctggggttatcggcgtcgtgcgcggttaagtctgaattgtccgccggat
aaaccgctgcaaatgggatttcgcaaagcgggttccagcgatatcgtcaatgtcgaacag
tgccccgttttggcgccccagcttgaagcattgctgccccgaatcagggcgtgtctggcg
agtttacacggcacccgacatcttgggcatgttgagctggtacaggcgggaagcggtacg
ctgatgattctgcgccataccgcgccattaagtgcggcggataaagaaaaactggaacgc
ttttcgcattctgagggattgtctctgtttctggcgccgtttagcgagatactggaaacg
gtatctggcgaggcgccctggtatgattcgcacggcttacgtttagccttcagtccgcga
gactttattcaggttaatgaggcggtaaaccagcaaatggtcgcccgcgcgctggagtgg
cttgatgtgcgcgccgaggatcgtgtcctggatctgttctgcggaatggggaattttacg
ctgccgctggcaacgcgcgcggcaagcgtgattggggttgagggcgttccggcgctggta
gaaaaaggccgtgaaaacgccatccgcaatggtttacataatgtgacattcttccatgag
aacctggaggaagatgtcacgaagcagccgtgggcgaaaaacggctttgacaaagtctta
ctcgatcctgcgcgtgcgggggctacaggagtgatgcgacatattataaaattaaaacct
attcgcattgtttatgtatcctgtaacccggcgacgctggcgcgcgatagtgaagcgctg
gtcaatgcgggatatgaggttacgcgtttagcgatgctcgacatgttcccgcacacagga
catctggaatcaatggttctgttcgagcgcatgtaa
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