Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_10275
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Entry
SEEH1578_10275 CDS
T02736
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03030
DNA replication
seeh03430
Mismatch repair
seeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SEEH1578_10275 (dnaE)
03430 Mismatch repair
SEEH1578_10275 (dnaE)
03440 Homologous recombination
SEEH1578_10275 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seeh03032
]
SEEH1578_10275 (dnaE)
03400 DNA repair and recombination proteins [BR:
seeh03400
]
SEEH1578_10275 (dnaE)
Enzymes [BR:
seeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SEEH1578_10275 (dnaE)
DNA replication proteins [BR:
seeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SEEH1578_10275 (dnaE)
DNA repair and recombination proteins [BR:
seeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SEEH1578_10275 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGQ63652
LinkDB
All DBs
Position
2070195..2073677
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDW
LVELKEGLILISGGRMGDVGRCLLRGNQALVEECVAFYETHFPDRYFLELIRTGRQDEET
YLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKAKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgttcacctgcgggtgcacagcgactactctatgatcgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatgcctgcgctggcg
atcaccgattttaccaacctctgcggtctggtgaagttctacggagcgggtcatggcgcg
ggcattaaacccatcgtcggggcggactttaacgttcacaacgaactgctgggagatgag
ctgactcatctgacggtactggcggcgaataatacgggataccagaacttgacgttgctg
atctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatcgagcgcgactgg
ttggtagagcttaaagaaggtttgattctgatttccggcggacgcatgggcgacgtaggc
cgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgctttctatgaaacg
cattttcccgatcgctacttcctggaactgatccgtaccggcagacaggacgaagagacc
tatctccatgctgcggttgaactggctgaggcacgtggtttgccggttgtcgcgacaaac
gatgtccgtttccttgaaagcgatgattttgacgcccatgagattcgtgtcgcgatccac
gacggtttcacgctcgacgatcctaaacgtccacgcaattattcaccgcagcagtatatg
cgcagtgaagaagaaatgtgcgagctgttctccgatattccggaggcgctggaaaatacg
gtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatatttcctgccgcag
ttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaagcgaaagaggggctg
gaagagcgtctggctttcctgtttccggacgaagaagagcgcaaaaagcgtcgcccggaa
tatgacgagcgcctggatattgaactacaggttatcaaccagatggggttccctggctac
ttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
ggacgtggttccggggctggttcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgagcacgtcgcagac
atgtacgggcgtgatgcggtatcgcaaattatcaccttcggtacgatggcggcgaaagcc
gttatccgcgatgtgggccgcgtgctggggcatccgtacggttttgtggatcgtatctcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcggaaccgcaa
ctgccggaaatttacgaggcggacgaagaggtcagagcgctgatcgatatggcgcgtaag
ctcgaaggcgtcacgcgtaacgccggtaagcacgctggcggcgtggtcatcgcgccgacc
aaaattaccgactttgcgccgctgtactgcgatgaagagggcaagcatccggttacccag
tttgataaaagtgacgtggaatatgccgggctggtgaagttcgacttcctcggtttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacaagcggcgcgagaaaaacggc
gagccgccgctggatatcgccgccattccgctggatgacaagaaaagcttcgacatgctg
cagcgctcggaaaccacggcggtcttccagcttgaatcgcgcggcatgaaagatctgatc
aaacgtctgcagccggactgctttgaagatatgatcgcgctggtggccctgttccgtccc
ggcccgttgcagtcagggatggtagataacttcatcgaccgtaagcacggtcgtgaagaa
ctctcttacccggacgttcagtggcagcatgaaagcctgaagccggtactggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtactttccgggtat
actctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaaacagcgttccgtttttgaagaaggcgcgaaaaagaacggtatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacgggtttaacaaatcgcac
tccgccgcttatgcgctggtttcttaccagacgctatggctaaaggcgcactatccggct
gaatttatggcggcggtgatgactgccgatatggataacaccgagaaggtcgtcggcctg
gtggacgagtgctggcggatgggactgaaaattctgccgccggatattaactccggattg
taccatttccacgttaacgatgagggcgagatcgtctacggcatcggcgcgatcaaaggc
gtcggcgaagggccgatcgaagcgatcatcgacgcgcgtaatcagggcggctatttccgc
gagctgtttgatctgtgcgcgcggaccgacaccaaaaagctcaaccgccgggtgctggaa
aagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgccgcgctgatgaac
tcattgggcgatgcgctgaaagccgccgaccagcacgctaaagcggaagctatcggtcag
gcggatatgttcggcgtgctggcggaagagccggagcaaatcgaacaatcctatgccagc
tgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggccaccccatcaatcagtatttaaaagaaattgagcgctatgtcggcggggta
aggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagctcgcgaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttacttaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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