Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_17530
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Entry
SEEH1578_17530 CDS
T02736
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seeh03009
]
SEEH1578_17530
Enzymes [BR:
seeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SEEH1578_17530
Ribosome biogenesis [BR:
seeh03009
]
Prokaryotic type
rRNA helicases
SEEH1578_17530
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
CMS1
Med20
Motif
Other DBs
NCBI-ProteinID:
AGQ65091
LinkDB
All DBs
Position
complement(3544866..3546239)
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGVQRDSLQ
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQT
LLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
QLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttcaaccctgaatgttttgcccgccgcccagctcaataaccttactgag
ctgggctatcttgagatgacgcctgttcaggccgcagcattacccgtcattctggcggga
aatgatgtgcgtgtgcaggccaggaccggtagcggtaaaacggcggcgtttggtcttggg
ctcttgcatcgaattgatgtcactctgttccagacacaggcattagtgctgtgcccgacg
cgggagctggcggatcaggtagccggggagttacgtcgcctggcccgttttctgccaaat
accaaaattctgaccttgtgtggcgggcagccctttggcgtacagcgcgactcgcttcag
cacgctccgcatatcattgtcgcgacgccggggcgcctgctggatcatttacaaaaagaa
accgtatcgctggatgcgctgcacattctggtaatggatgaagcagaccgaatgctggac
atgggattcagtgacgccattgatgaggtgatccgctttgcgcctgcgacgcgccagacg
ttgttgttttcagcaacctggcctgaggccattgcggcgattagcggtcgtgtacagcag
cagccaatacgtattgaaatcgatacggtagatgcgctaccggctatcgaacaacagttc
ttcgaaacgtctgcgcatgaaaaaatttcgctgctacaaacgttgcttagccagcatcag
ccagcgtcctgcgtggtattttgcaataccaaaaaagattgtcaggccgtttgtgatgcg
cttaatgcggtaggacaaagcgcgttggcgctccacggcgatctggaacaacgcgaccgc
gaccagacgttggtgcgttttgcaaacggtagcgcgcgcattctggttgccaccgacgtt
gccgcgcgaggattagacattaaatcgctcgaactggtggttaactatgaactggcctgg
gacccggaggtgcatgtccatcgtattggccgtacggcgcgcgcgggaagcagcggcctg
gcgatcagtttctgcgcgccggaagaggcgcagcgggcgaatattctttcagaaatgctg
caactcaagctgaactggctgaatgcgcccgcccggcagccgttactccctctggccgca
gagatggctaccctatgcattgacggcggcaaaaaagcgaaaatgcgtccgggagatatt
ttgggcgcgctgaccggcgatattggattagacggggcggatatcggcaaaattaatgtg
catccaatgcacgtttacgtcgccgtacgtcaagcagtagcgcaaaaagcctggaagcag
ttgcaaaacgggaagatcaaaggcaagtcatgccgggtacggctattaaaatga
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