Salmonella enterica subsp. enterica serovar Heidelberg 41578: SEEH1578_22230
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Entry
SEEH1578_22230 CDS
T02736
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
seeh
Salmonella enterica subsp. enterica serovar Heidelberg 41578
Pathway
seeh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
seeh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SEEH1578_22230 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seeh03019
]
SEEH1578_22230 (rnc)
03009 Ribosome biogenesis [BR:
seeh03009
]
SEEH1578_22230 (rnc)
03036 Chromosome and associated proteins [BR:
seeh03036
]
SEEH1578_22230 (rnc)
Enzymes [BR:
seeh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SEEH1578_22230 (rnc)
Messenger RNA biogenesis [BR:
seeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SEEH1578_22230 (rnc)
Ribosome biogenesis [BR:
seeh03009
]
Eukaryotic type
90S particles
RNase
SEEH1578_22230 (rnc)
Prokaryotic type
rRNA processing factors
SEEH1578_22230 (rnc)
Chromosome and associated proteins [BR:
seeh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SEEH1578_22230 (rnc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGQ66025
LinkDB
All DBs
Position
complement(4530034..4530714)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSNIQTVEQLILNWYKTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gagctgttgcagcaggcattaactcaccgcagcgccagcagtaaacataacgaacgcctg
gaatttttaggcgattcaatcctgagcttcgttatcgctaacgcgctttatcaccgtttt
ccacgggtggatgagggagatatgagccgtatgcgcgccacgttggtacgtggtaatacg
ctggcggaattagcccgtgaatttgatttaggcgagtgcctgcgtttagggccgggcgaa
ttaaaaagcggcggattccgtcgggagtccattctggcggacaccgttgaagcgttaatc
ggcggagtatttctcgatagtaatatccagaccgtcgagcagttaatccttaactggtat
aaaacccgtctggatgagataagtccgggcgataaacaaaaagatccgaaaacgcgcttg
caggagtatttgcagggtcgccatctgccgctgccatcttacctggttgtgcaggtacgc
ggcgaggcgcacgatcaggaatttactatccactgccaggtcagcggcctgagcgaaccg
gtggttggcacgggttccagccgtcgtaaggcggagcaggctgccgccgaacaggcgctg
aaaaaactggagttggaatga
DBGET
integrated database retrieval system
