Salmonella enterica subsp. enterica serovar 4,[5],12 i - str. 08-1736: SE451236_10810
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Entry
SE451236_10810 CDS
T02738
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
seen
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736
Brite
KEGG Orthology (KO) [BR:
seen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
seen01002
]
SE451236_10810
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seen01011
]
SE451236_10810
Peptidases and inhibitors [BR:
seen01002
]
Cysteine peptidases
Family C82
SE451236_10810
Peptidoglycan biosynthesis and degradation proteins [BR:
seen01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SE451236_10810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-GeneID:
16387650
NCBI-ProteinID:
AGQ85646
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Position
2330403..2332244
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AA seq
613 aa
AA seq
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MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAATDLAGPQKQSAATAIM
AGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAARDMKPMWDNRDAVKAFQQQ
LAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGQRWLYSNK
PYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQYAPMHDALLKLVADSRPWPQLTN
TATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDE
PTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALN
IQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVN
PPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFR
FQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLL
QDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLTARS
SAQIVPKVEQLIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaataagatgtgtggtcgttgtctgtcggcaatcagtttatgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaaatgatacctggcgatagc
gccgttgccgcgacggatctggctgggccgcagaagcaatcagccgcgacggcgattatg
gccgggattcagccgctgccggagggcgtttcagccgagaaagtccgggctgatttacag
tcgcagcttccttccggctatacgccggtctatatgagccagctgacattgctgtatgcc
gcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagccttccagcaacag
ttggcggaggtggcgattgccggattccagccgcagtttaccgcctgggtggcattgttg
accgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagacgccatgatgggc
tatctccatttcattgcgaatatccccgtcaaaggccagcgctggttatatagcaacaaa
ccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaaatcgcgctggaa
gagggccagttgccgatgtttgtcgccagcctggcgccgcagcacccacagtatgcgccc
atgcatgatgcgctgctgaagctggtggcggactctcgcccgtggccgcagttgaccaat
accgcgacgctgcgcccggggcaatggagtaacgatgtgcctgcgctgcgcgaaatatta
cagcgtacggggatgctggatggcggtccaaagatagccttacccggcgataacactgct
gatagcgccgtcgtcagcccctccgccgtggtcgacgaaacatcggtggcgcacgacgaa
ccaacggcccgccgtagtaagccggctccggcggcacgcgcctacgatcgtgaactggtc
gaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggcgttattggcccg
gcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgtactggcactgaat
atccaacgtttacgcctgctgccagcggaactctctaccggtattatggtaaacattccc
gcttattcgctggtctactatcagaatggcaaccaggtgctggcttcaagggtgatcgtc
gggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataatgtggtggtgaac
ccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccgaaggtgtggaat
gacccaggctatctggagcgccatggctacaccgtgatgcgcggctggaacagcaaagaa
gcgatcgatccgtggcaggttgactgggccaccattacgccatcgaatcttccgttccgt
ttccagcaggcgccaggcgcgcacaattcgctggggcgttataaatttaatatgccgagt
tcagatgcgatctatctgcacgatacgcctaaccatactctctttcagcgtgacgccagg
gcgttaagttccggctgcgtgcgggtcaataaggcctctgagctggcgaatatgctattg
caggatgctggctggaacgatgcgcggatctcaggcgccctgaagcaaggcgacacgcgg
tatgtcaatatccggcagaacattccagtaaatctttactatctgaccgcatttgtcggc
gcagatggacgtatgcaatatcgtacagatatttacaattacgatctcacagcgcgatcc
agcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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