Salmonella enterica subsp. enterica serovar 4,[5],12 i - 08-1736: SE451236_11930
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Entry
SE451236_11930 CDS
T02738
Name
(GenBank) peptigoglycan-binding protein LysM
KO
K19236
L,D-transpeptidase YcfS
Organism
seen
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 08-1736
Pathway
seen01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
seen00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SE451236_11930
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
seen01002
]
SE451236_11930
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
seen01011
]
SE451236_11930
Peptidases and inhibitors [BR:
seen01002
]
Cysteine peptidases
Family C82
SE451236_11930
Peptidoglycan biosynthesis and degradation proteins [BR:
seen01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SE451236_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-GeneID:
16387874
NCBI-ProteinID:
AGQ85823
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All DBs
Position
complement(2542971..2543936)
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AA seq
321 aa
AA seq
DB search
MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGK
NTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQAFKDAPQTDAAVMEHVM
EVRSGMPVDVTRQAEAKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaatacgcgactctctcgctggtgggcgttgcttgcgcttaccgcgaccatc
atgcttgcccttcccgcgcaggcgaatacgtggcctcttccgccccccggcagtcgactg
gtgggagaaaataaattccatgtcgttgaagacgacggcggctcgctggaggcgatcgcc
aaaaaatataacgtgggctttttagccctgttacaggccaaccccggcattgatccttat
gtgccacgcgcaggcagcgtgctaacgattccgctgcaaacgctgctaccggacgcgcca
cgtgaaggtatcgtcattaacctcgcggaattacggctttactattatcaaccggggaaa
aatacggtcacggtctaccctatcgggattggccaactgggcggcgataccctgacgcca
acgatggtgacgaccatttcggataaacgcgccaatccaacctggacgccgaccgccaat
attcgcgcccgttataaagcgcaaggtatcgatctccccgccgtggtgcctgccggtccc
gataacccaatgggacatcacgcgattcgtttagcggcctacggcggcgtctatctgtta
catggcacgaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgtctg
cgcgacggtgatatagagacattgttccgtcaggtcacgccgggaaccaaagtgaatatt
atcaatacgccgattaaagcctcggtggagccaggcggcgtgcgactggtggaagttcat
cagccgctgtctaaaaatataggcgacgatccgcaggtgttgccgattgtgctgaatggc
ccgatgcaggcctttaaggacgcgccgcagaccgatgctgcggtgatggaacatgttatg
gaagtgcgttccggaatgccggtggatgtaacccgtcaagcagaggcgaaaccgcagtcg
ctgtaa
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