Salmonella enterica subsp. enterica serovar 4,[5],12 i - 08-1736: SE451236_14440
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Entry
SE451236_14440 CDS
T02738
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
seen
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 08-1736
Brite
KEGG Orthology (KO) [BR:
seen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seen03016
]
SE451236_14440
Enzymes [BR:
seen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SE451236_14440
Transfer RNA biogenesis [BR:
seen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SE451236_14440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-GeneID:
16388376
NCBI-ProteinID:
AGQ86214
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All DBs
Position
3041674..3043608
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQH
EFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSK
LDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAF
FAATIESKAKLAYDNVSDWLENNGTWQPDNEGIAQQIRLLHRICLSRSEWRHHHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANLCAARVLRDKLGFGIYNVHTGFD
PANADALAALLKTHGLHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGEAIARPQEDITQQMAERRRLNRM
AERDVGDWLYARFLNDKAGTNTRFAAEIIDVSRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgctgaaggggtcgtaaaagccacggaaaaaggctttggcttccttgaggttgacgcg
caaaaaagctatttcattcctccgccgcagatgaaaaaagtgatgcatggcgatcgtatc
gtcgcggtcatccacacggaaaaagaacgtgagtctgccgagccggaagaactgatcgaa
ccgttcctgacgcgttttgtgggaaaagttcagggtaaaaatgaccgcctgtccatcgtg
ccggatcatccgttgctgaaagacgcgattccctgccgcgccgcgcgcggcgttcagcat
gagttcaaagaaggtgactgggcggttgccgaaatgcgccgccatccgcttaaaggcgac
cgttcgttttacgccgatttaacgcagtacatcacctttgccgacgatcactttgttccc
tggtgggttacgcttgcccgccacaacctggaaaaagaagcgccgaacggcgtagcgacg
gagatgcttgacgaagggctagagcgtcaggatctgaccgcgctgaatttcgtcactatc
gatagcgccagcactgaagatatggatgacgcgctatatgctgaggaattagcggacggc
agactccagcttacggtggctatcgccgatcctaccgcctggattgccgaaggcagtaag
ctggataacacagcgaaaattcgcgccttcaccaactacctgccgggcttcaatattcct
atgctgccgcgtgagctgtctgacgatctgtgttcgctgcgcgccaacgaagtgcgtccg
gcgctcgcctgtcgcatgataatcgccgcggacggcaccattgacgatgatatcgccttt
tttgcggccaccatcgaatcgaaggccaagctggcgtacgacaatgtctccgactggctg
gaaaataacggcacctggcagccggataacgaaggcattgcccagcagattcgtctgttg
caccgtatttgtctaagccgcagtgagtggcgtcatcatcatgcgttagtctttaaagac
cgcccggattaccgctttgtgcttggcgaaaaaggcgaagtactggatattgtggcggaa
ccgcgccgtatcgctaaccgtatcgtagaagagtcgatgatcgccgctaacctttgcgcc
gcgcgcgtactgcgcgataagctcggtttcggtatttacaacgtacatacgggcttcgat
cccgcgaatgccgacgcgctggccgcgctgctgaaaacgcatggtctgcatgtcgatgcc
gaagaggtgctgacgctggaaggcttctgtaaactgcgtcgcgaactggatgcgcagccc
tccggtttccttgacagccgcattcgtcgcttccagtcttttgcggaaatcagcaccgag
ccggggccgcatttcggtcttggtcttgaggcttacgccacctggacctctcctatccgt
aagtatggcgatatgattaaccatcgcctgctgaaagcggtcatcaagggggaagctatt
gcgcgtccgcaggaagatatcacccaacaaatggcggaacgccgtcgcctgaaccgcatg
gcggagcgcgatgtcggcgactggttatatgcacgcttccttaacgataaggcggggaca
aatacccgtttcgcggcagaaattattgacgtcagccgcggtggtatgcgcgtgcgactg
gtcgataacggcgctatcgcctttatccctgccccgttcctgcacgccgttcgcgatgaa
ctggtatgcagccaggaaaacggtacggtacagattaaaggtgagacggtttataaagtg
acggatgtcattgatgtcactattgcggaagttcgcatggaaacccgcagcattattgcc
cgaccggcagcgtaa
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