Salmonella enterica subsp. enterica serovar 4,[5],12 i - 08-1736: SE451236_19415
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Entry
SE451236_19415 CDS
T02738
Name
(GenBank) exodeoxyribonuclease
KO
K10906
exodeoxyribonuclease VIII [EC:3.1.11.-]
Organism
seen
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 08-1736
Brite
KEGG Orthology (KO) [BR:
seen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seen03400
]
SE451236_19415
DNA repair and recombination proteins [BR:
seen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SE451236_19415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VIII
DUF3799
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
16389369
NCBI-ProteinID:
AGQ87019
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All DBs
Position
4060348..4063275
Genome browser
AA seq
975 aa
AA seq
DB search
MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFP
VVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEV
LEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEIL
RLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLK
TWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAM
ATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAH
PEFYHYPGRLQGYINANLTETDHENPAEEALTTARHTPEKDAVEEANRQLAAARGDYVEG
ISDPNDPKWVKTETSQPASEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQK
ADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQE
EPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPV
LDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKA
LLEEYNATLPAPVPLGASLEETGQSYMALPAEYQRIDADQKQTAAAMKACIKEYNTTLST
PVKTSGSRDALLEQLAIINPDLVTQEAQKSVPLKVSGTKADLIQAVKSVNPAAVFADELL
DTWRENPEGKVLVTRQQLSTALNIQKALLGHPTAGKLLTHPSRAVEVSYFGIDEETGLEV
RVRPDLEIDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQ
FFWIFVNKDENYHWVAIIEASTELLELGMLEYRKAMRAIANGFDTGEWPAPITEDYTEEL
NDFDVRRLEALRVQA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaactaatcctgtatttttagtccgcaaagcaaagaaatcatcaggccagaaa
gacgctgtactctggtgcagtgatgattttgaagcggcaaatgcaacactggattatctt
ctgattaaatccggtgcgaagctgaaagattatttcaaagctgtcgctactaatttccct
gtcgttaacgagctgccgccggaaggcgaactgagcctcactttctgcgattactatcag
ctcgctaaagacaatatgacctggacgcaaatccccggcgtcaccctgccatcatctgaa
gccgccgccgcggcgcgccagcatatcgtcgatggtgttgataccgaaacaggcgaagtg
ctggaagaccacaccgaaaattttggtaacgaaagcaacagccctgcccaggcaacagcc
ccagcccccgagctgactgttgtcgcaactatgcctctccgtcaccgcgttcttgctcag
tacataggtgaaggtgagtatctttatcacgtcgacgcctcccagaaaaaagaaattctg
cgtctcgaaatggacaccgataattcttatgtccagaacctgctgcttgccgccgagaat
gttgaagcgttcaagaaagccattgaacatgacattcacaaaatagtgaatgccgttaaa
aaagtattccctgtcgatggaaaaactcctgaactggcgactgttatccagttccttaaa
acatggttcgagacggagcatatcgatcgcggtttgctcgttaaggagtgggcgaaaggc
aaccgtgtatcggctattcagcgcactgaaagcggcgccaacgctggcggtggcaataag
actgaccgtaaccctgattacgaacacactcttgatactctggacgtagagattgcaatg
gccactttgcctatggactttaatatctatgagctacctggcagcgtttaccgtcgcgca
aaagaaatcgtaaagaaaaaggaaagtccgttcaaagaatggtccgcagcgcttcgcgca
acgcccggtatcctggattattcccgcgccgctattttcgcgctgatccgaagcgcacac
cccgagttttatcactaccccggacgccttcaggggtatatcaacgccaacttaacggag
actgatcacgagaaccccgccgaggaagctctcacgactgcccgacacactccggaaaaa
gacgcggtagaagaagccaaccgacagcttgccgccgcacgcggtgactacgtcgagggc
atcagcgacccgaacgacccaaaatgggtgaaaaccgagacaagccaaccggcatctgag
cctgaactggttaaaaatgttggcaacggtattttcgacgtgtccgctttaatgcagaac
tcatcaactcatggcacagaaacgaatccggagaccaccagcaatgtgcaggttcaaaaa
gctgacagtgatgaaaaacaggctggtgatgcggtgcaggcaggcgaaggcgatctgggt
actggtaaagaagcagttaccgtagagaaccagaatcaggctgagacgcaccagaacaac
gattctgtgagccaatctgaacctgaggcgcaacaaaacgtaccggaatcgcaacaagaa
gagccagaagcagcctggccggaatacttcgagccgggccgctatgaaggtgtaccaaac
gaggtttaccacgccgccaacgggatcagctcaactcaggtgaaagatgctcgcgtgtcg
ctgatgtactttaacgcgcgtcacgtagagaagactatcgtcaaagagcgctctccagtg
cttgatatgggcaacctggtacatgttctggctctacagccggaaaacctcgaagcggag
ttcagcgtagagccggagatccctgagggtgctttcaccaccaccgccaccctgcgcgag
ttcatcgacgcgcacaacgccagcctgccagcgctgctgagtgctgacgatatcaaagcg
ctgctggaagagtacaacgccaccctgcccgcgccagtaccgctgggcgccagtctggaa
gaaacaggccaaagctacatggcgctacctgctgaataccagcgcattgacgcagaccag
aaacaaacagccgcagccatgaaggcctgtatcaaagagtacaacaccaccctgtctacg
ccggttaaaacgagcggcagtcgtgacgcgcttcttgagcaactggcaataatcaacccc
gacctggtcacgcaagaagcgcaaaaatcggtgccgttgaaagtatctggcacaaaggcc
gatctgattcaggccgtgaaatcagtaaatccggcagcggtattcgccgacgaattgctg
gatacgtggcgggagaaccccgaagggaaagtactggtcacccgccaacagctcagcacc
gcgctgaacattcaaaaagccctgctggggcacccgaccgccggcaaattgctgactcac
ccaagccgcgctgtcgaggtgagctactttgggattgatgaggaaaccgggttggaagtc
cgggtacgccctgaccttgagatcgatatgggcggcctgcgcattggcgccgatctgaaa
actatcagcatgtggaacatcaaacaggaaggcctgcgtgcgaagttgcacagggaaatc
atcgacagggactatcacctgagcgcggctatgtactgcgaaaccgccgcactggatcag
ttcttctggatattcgtcaacaaagacgagaactaccactgggtcgccatcattgaggcg
tccaccgaactgctggaacttggcatgctcgagtaccgcaaagcgatgcgtgcaatagcg
aacggtttcgatactggcgaatggcctgcaccgattaccgaagactacaccgaagaactc
aatgattttgatgtgcgtcgccttgaagcgctgcgcgtacaggcataa
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