Salmonella enterica subsp. enterica serovar Pullorum: I137_15380
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Entry
I137_15380 CDS
T02790
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
seep
Salmonella enterica subsp. enterica serovar Pullorum
Pathway
seep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seep00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I137_15380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seep03021
]
I137_15380
Transcription machinery [BR:
seep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I137_15380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DNA_ligase_A_N
TMPIT
YicC-like_N
Motif
Other DBs
NCBI-ProteinID:
AGS64215
LinkDB
All DBs
Position
3275170..3277152
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AA seq
660 aa
AA seq
DB search
MPHIDREAPDSRSERQRPKYKYALALNVDSYTVDTNQTNKCGYRLMEQNPQSQLKLLVTR
GKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAENTTSTD
EDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCS
VAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEEMAPTATHVGSELSQEDLDDD
EDEDEEDGDDDAADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLS
EVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSE
TWFNAAIAMNKPWSEKLHDVAEEVQRCLQKLRQIEEETGLTIEQVKDINRRMSIGEAKAR
RAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDK
IRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTA
REAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatatcgatcgggaagcccccgacagccgcagtgagaggcagcggccaaaatat
aagtatgccctcgctttaaatgtcgacagctataccgtcgacaccaatcaaacgaataag
tgtggataccgtcttatggagcaaaacccgcagtcacagctgaaacttcttgtcacccgt
ggtaaggagcaaggctatctgacctatgctgaggtcaatgaccatctgccggaagatatc
gtcgattcagatcaaattgaagatatcatccaaatgatcaacgacatgggtattcaggta
atggaagaagcgcctgatgccgatgatctgctgctggctgaaaataccaccagcaccgat
gaagatgcggaagaagctgctgcacaagttctgtccagtgttgagtctgaaatcggtcgt
acgactgacccggtacgcatgtatatgcgtgaaatgggcactgttgaactgttgacccgg
gaaggcgaaatcgacatcgctaaacgtatcgaagacgggatcaaccaggttcaatgctcc
gttgccgaatacccggaagccattacctatctgctggaacagtacgatcgcgttgaggct
gaagaggctcgtttgtccgatcttatcaccggctttgtcgatccgaacgcggaagaagag
atggcgccgaccgcaactcacgtcggttctgaactctcccaggaagacctggatgatgac
gaagacgaagatgaagaagacggcgacgatgacgccgccgatgacgacaacagcattgac
cctgaactggcacgcgaaaaattcgctgagctgcgcgcgcaatacgtcgttacgcgcgac
accatcaaagcgaaaggccgcagccatgctgccgcgcaggaagagattctgaagctgtct
gaagtgttcaaacagttccgtctggtaccgaagcaattcgactatctggtcaacagtatg
cgcgtgatgatggatcgcgtgcgtacccaggaacgtctgatcatgaagctctgcgtcgag
cagtgcaaaatgccgaagaagaactttatcacgctgtttaccggtaacgaaaccagcgaa
acctggttcaacgccgctatcgcgatgaacaaaccgtggtcggaaaaactgcacgatgtc
gcggaagaagtgcaacgctgtctgcaaaaactgcggcagattgaagaagagaccggtctg
accatcgaacaggtgaaagacatcaaccgtcgaatgtccatcggggaagcgaaagcccgc
cgtgcgaagaaagagatggttgaagcgaacttacgtctggttatttctatcgctaagaaa
tacaccaaccgtggcttgcagttccttgatctgattcaggaaggcaacatcggtctgatg
aaagcggtagataagtttgaataccgtcgcggctacaagttctccacctatgcaacctgg
tggatccgtcaggcgatcacccgttctatcgccgatcaggcgcgcaccatccgtattccg
gtgcatatgattgagaccatcaacaagctcaaccgtatttctcgccagatgctgcaagag
atgggccgcgagccaacgccggaagagctggctgaacggatgctgatgccggaagataaa
attcgtaaggtgctgaagattgccaaagagccaatctccatggaaacgccgatcggcgac
gatgaagattcgcatctgggtgatttcatcgaggataccaccctcgagctaccgctggac
tctgccactaccgagagcctgcgtgccgccactcacgacgttttggctggcctgaccgct
cgtgaagcgaaagtgctgcgtatgcgtttcggtatcgatatgaacaccgaccacacgctg
gaagaagtgggtaaacagttcgatgttacccgcgaacgtatccgtcagatcgaagcgaag
gcgctgcgtaaactgcgccacccgagccgttctgaagtgctgcgcagcttcctcgacgat
taa
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