Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_0204
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Entry
UMN798_0204 CDS
T01782
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMN798_0204 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sef03019
]
UMN798_0204 (pcnB)
Enzymes [BR:
sef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
UMN798_0204 (pcnB)
Messenger RNA biogenesis [BR:
sef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UMN798_0204 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AFD57231
LinkDB
All DBs
Position
complement(213868..215232)
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AA seq
454 aa
AA seq
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MLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSE
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGV
IRLIGNPETRYREDPVRMLRAVRFAAKLNMHISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGNGYETYQQLREYHLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMR
VNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENNTELQRLAQWWAEFQASAP
PEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgatt
atcccgcgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgccctcaaggta
ctgtacaggctgaacaaagcgggctatgaagcctacctggtcggcggcggcgtccgcgat
ctcctgctcggcaaaaagccgaaggatttcgacgtgactaccaacgcaacaccggatcag
gtacggaaattattccgcaattgccgtctggtgggacgtcgtttccgcctggctcacgtg
atgtttggcccggaaattatcgaagtggcaacgtttcgtggtcatcatgaaggcagtgaa
agcgaccgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgacaacatcttc
ggctctatcgaagaagatgcccagcgccgcgatttcaccatcaacagcctttactacagc
gtggcggattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaagaaggcgtg
attcgcctgatcggcaatccggaaacgcgctaccgcgaagatccggttcgaatgctgcgc
gccgtgcgtttcgctgcgaagctcaatatgcatatcagccctgaaacggctgagccaatc
ccgcgtctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaagagtcgctg
aagctgttgcaggcggggaacggttacgaaacctatcaacaactgcgggaataccacctc
ttccagccgttgtttcctaccattacgcgttatttcaccgaaaacggcgacagcgcaatg
gaacgcatcattgcgcaggtgttgaagaatacggataaccgcatccgtaacgagatgcgc
gttaatccggcatttttgtttgccgccatgttctggtatccgctgctggagatggcgcaa
aaaatcgctcaggagagcggtctggcctattacgacgctttcgcgctggccatgaatgat
gtgctggatgaggcctgccgttcactggcgatcccgaaacgccttaccacgcttacccgt
gatatttggcagcttcagttacgcatgtcgcgacgtcagggcaaacgcgcctggaaactg
atggaacatcccaaattccgcgccgcgtttgatttactggagctgcgcgctcaggtggaa
aataatactgaactgcaacgtctggcgcagtggtgggccgagtttcaggcttccgcgccg
ccggaacaaaaagggatgctcaacgagctggacgacgatcctgctccacgccgccgtcgt
tcacgtccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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