Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_2294
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Entry
UMN798_2294 CDS
T01782
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UMN798_2294 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sef03400
]
UMN798_2294 (alkA)
Enzymes [BR:
sef01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
UMN798_2294 (alkA)
DNA repair and recombination proteins [BR:
sef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UMN798_2294 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AFD59057
LinkDB
All DBs
Position
complement(2208567..2209466)
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AA seq
299 aa
AA seq
DB search
MLKGQIKEKSMFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLVSV
RPHLPTHTVQVSVSAGLLPVAPACLAKVSRLFDLDCQPAQVAAVLGPLGEDRPGLRLPGS
VDTFEQGVRAILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLALADPLALK
ALGMPLRRAEALIHLAQATLAGKLALAAPPDIEQSVKNLQTFPGIGRWTANYFALRGWQA
KDIFLPDDYLIKQRFAGMTPAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaggtcaaataaaggagaaaagtatgtttaccctgagctggcagccgccttac
gactggtcgtggatgttgggctttcttgccgcgcgtgcggtggacggcgtggaaacagta
ggcgagggcttttatgcgcgcagcctggtggtgggcgagcatcgcggactggtcagcgtg
aggccccatctgcccacccacactgtgcaggttagcgtgagcgccggattacttcccgtc
gcgccggcgtgtctggcgaaagtttcgcgtctgtttgatcttgactgccagcccgcgcag
gttgccgccgtgctggggccactgggcgaggacagaccggggctgcgtttaccgggatcg
gttgatacgtttgaacagggcgtgcgggcgatactggggcaactggtgagtgtcgcgatg
gcggcaaggttgacggcgaaagtggcgcgccgctatggcgaggcgttgccggatgcgccc
gattatgtctgttttcccggtccggaaacgctggcgttggccgatccgctggcgcttaaa
gctctggggatgccgctgcggcgcgccgaagcgctgattcatctggcgcaggcgacgctg
gcgggaaaactggcgctcgccgcgccgccggatattgagcagagcgttaaaaatttacaa
acgtttccgggaattggccgctggacggcgaactatttcgccctgcgcggttggcaggca
aaagatatctttttgcccgatgattacttaattaagcagcgcttcgccgggatgacgccc
gcgcagatccgtcgctacgcggagcgctggaaaccgtggcgttcctacgcgctactgcat
atctggtatacccacggctggcaaccgtcaatggatagcgaaatagctggtattcagtaa
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