Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_3083
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Entry
UMN798_3083 CDS
T01782
Symbol
ygaA
Name
(GenBank) putative sigma-54-dependent transriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sef03000
]
UMN798_3083 (ygaA)
Transcription factors [BR:
sef03000
]
Prokaryotic type
Helix-turn-helix
Other families
UMN798_3083 (ygaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
Mg_chelatase
AAA
MCM
AAA_5
GAF_3
AAA_2
Motif
Other DBs
NCBI-ProteinID:
AFD59738
LinkDB
All DBs
Position
complement(3004681..3006201)
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AA seq
506 aa
AA seq
DB search
MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLA
QDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFA
GQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQLESQNMLPGSSGVFE
PIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLFVPPLRE
RGDDVVLLAGYFCEQCRLRLGLSRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARA
TRAGDEVILEAQHFALSEDVLPAPPAESFLALPTCRNLRESTENFQREMIRQALAQNNHN
WAASARALETDVANLHRLAKRLGLKD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgtggaggtattggcgggcatcgccattgagttacaacgcggcattggg
catcaggatcgttttcagcggctgattactacgctgcgtcaggtgctggcgtgcgacgcc
tcggcgctgctgcgctatgaatcacgacaatttattccactggcgattgatggcctggcg
caggacgtcctcggcagacgttttaccctggaagggcatccgcgcctggaagccatcgcc
cgcgcgggggacgtggtgcgttttccggctgatagcgatttacccgatccgtatgacggg
ttaattcccggacaggaaagcctgaaagtccacgcctgtgttggtctgccgctgtttgcc
ggacagaacctcatcggtgcgctgacccttgatgctatgacgccggagcagttcgaggta
tttagcgatgaagaactacggcttgtcgccgcgctggccgccggggcattgagtaatgcg
ctgttaattgaacaactggaaagccagaacatgctgccggggtcgtcaggcgtgtttgaa
ccgataaaagagacgcacatgatcggcctgtcgccggcgatgacgcagttgaaaaaagag
atcgagattgtggcgggctccgatcttaacgtgctgatcggcggtgaaacggggaccggt
aaagagctggtggcgaaagctattcaccagggctcccccagagcggttaatccgctggtc
tatctcaactgcgccgcgctgccggaaagcgtggcggagagcgagttgtttggtcatgta
aaaggggcttttaccggggctatcagtaatcgtagcggtaagttcgaaatggcggataac
ggtacgctgtttctggatgagattggcgaactgtcgctggcgctacaggctaagctactt
cgcgtgttgcagtatggcgatattcagcgcgtcggcgacgatcgtagcctgcgcgtggac
gtgcgggtgttggcggcgaccaaccgtgacctgcgtgaagaggtgctggcagggcgtttt
cgcgccgatctgttccatcgcctgagcgttttcccgctctttgtgccgccgctgcgcgag
cgcggcgatgatgtggtgctgctggcgggctatttttgcgagcagtgccgactgcggctg
gggctgtcccgcgtggtactgagtcccggcgcacgtcgccatttgctcaactatggctgg
ccgggcaacgtccgggagctggaacatgccattcaccgtgcggttgtactggcgagagcg
acccgggcaggggatgaggtgatactggaggcacagcattttgccttgtcagaggacgtt
ttacccgcgccgcctgcggaaagctttctggcgctgccgacttgccgcaatttgcgcgaa
tcgacggagaacttccagcgagagatgattcgccaggcgctggcgcaaaataatcataac
tgggcggccagcgcgcgggcgctggaaaccgacgtcgccaacctgcatcggctggcgaag
cgtctgggactgaaggattag
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