Salmonella enterica subsp. enterica serovar Typhimurium 798: UMN798_4171
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Entry
UMN798_4171 CDS
T01782
Symbol
recF
Name
(GenBank) recF protein
KO
K03629
DNA replication and repair protein RecF
Organism
sef
Salmonella enterica subsp. enterica serovar Typhimurium 798
Pathway
sef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UMN798_4171 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sef03400
]
UMN798_4171 (recF)
DNA repair and recombination proteins [BR:
sef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UMN798_4171 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
ABC_tran
AAA_16
AAA_29
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AFD60689
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Position
complement(4061448..4062521)
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AA seq
357 aa
AA seq
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MSLTRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGRV
IRHEQEAFVLHGRLQSEERETSIGLTKDKQGDSKVRIDGTDGHKIAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQRNAALRQVSRYEQLRPWDKE
LIPLAEQISTWRAEYSSAIAQDMADTCQQFLPEFSLTFSFQRGWEKETDYADVLERSFER
DRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgacgcgccttttaatcaaagacttccgcaacatagaaaatgcggatctcgct
ttatcccccggctttaacttcctggttggcgccaacggcagcggcaaaaccagcgtgctg
gaagctatctatacgcttggccatggtcgggcgtttcgcagtttgcagcctggccgcgtg
attcgtcatgagcaggaagcgtttgttcttcacgggcgattacagagcgaagagcgtgag
acgtcgattggcttaaccaaagataagcagggcgacagcaaggtccgtatcgacggtacc
gacggtcacaagatcgcggagctggcgcatttaatgccgatgcagttgattacgccggag
gggtttactttactcaacggcggccccaaatacagaagagcgttccttgactggggatgc
tttcacaacgaagccggattcttcaccgcctggagcaacctgaaacgattgctgaaacag
cgtaatgccgcgctgcgccaggtgagtcgttatgagcaattgcgcccgtgggataaagag
ctgattccgctggcggaacaaattagtacctggcgggcggagtacagtagcgctatcgca
caggacatggcggatacctgtcagcagtttttacctgaattttccctgacgttctctttc
cagcgcggctgggagaaagagacagactatgcggacgtgctggagcgaagctttgagcgt
gaccgtatgttgacctacaccgcgcacgggccgcataaagcggactttcgcattcgcgcc
gacggcgcgccggtggaagataccctgtcgcgcgggcagctaaagttattgatgtgcgcc
ttacgtctggcgcagggcgagttcctcacccgcgaaagcgggcggcgctgcctgtacctg
atagatgattttgcctctgaacttgacgatgcgcgtcgcggactgctggccagccgctta
aaagccacgcaatcgcaggtctttgtcagcgcaattagcgctgaacacgttatagacatg
tcggatgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa
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