Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG0407
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Entry
SG0407 CDS
T00770
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
seg
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Brite
KEGG Orthology (KO) [BR:
seg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seg03400
]
SG0407 (sbcC)
DNA repair and recombination proteins [BR:
seg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG0407 (sbcC)
Archaeal homologous recombinant proteins
SG0407 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
DUF6918
nSTAND3
AAA_15
cobW
AAA_21
TsaE
ABC_ATPase
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
CAR36306
UniProt:
B5R6P7
LinkDB
All DBs
Position
complement(444042..447182)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNQPDGNLQAPRVELARCS
DGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTE
IYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQ
VQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQ
EQTRAVERVRQHSDEVNARLQSAYRLRRRIRACAHRQFTQLNATGQRLKTWLAEHDGIRI
WRSELAGWRALLTQQSHDRAQLSQWQQQLLSDTRQRDALPPLTLDLTPQALAEARALHTR
QRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQAQYTQRLADKRLSYKTKAQELADV
RTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVK
TLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAG
WLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADLAQYTLSLPAP
EDEASWLNERADEAKIWQQRQTEFADLQMQIDRLAPLLETLPQTDTADSDDDVPLDNWRQ
AHDECVSLQSQLQTLQEQTTQEQQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTR
LEKQQQTLESQLQQAKALSAQSAQALADHQQQPPAGLDPTCTAEQLAQRLTQLAQQLREN
TTRQGEIRQQIKQDADNRQRQRALMAEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDKAFAVE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcgtctgaaaaacctgaactcgctgaaaggagaatggaaggtc
gattttaccgccgaaccgtttgccagtaacgggttattcgccattaccggcccgaccggc
gcgggaaaaaccaccttgcttgacgccatctgcctggcgttgtaccacgaaacgccgcgc
ctgaatacggtatcgcaatcgcaaaacgatttgatgacgcgcgatacggcggaatgtctg
gccgaagtggagtttgaggtaaaaggcgaagcctggcgcgcgttctggagccagaaccga
gcccgaaatcagcctgacggcaatctccaggccccacgcgtggagctggcgcggtgttca
gacggaaagatctttgccgataaggtaaaggataaactggagatgatcgccacgttgacc
gggctggactacgggcgcttcacccgttcgatgttgttatcacaggggcagttcgccgcc
tttcttaacgccaaagcgaaagagcgcgcagagcttctggaggagctcaccggcactgag
atttacgggcagatctccgcacaggtatttgaaaaacataaatcagcccgtctcgaactg
gaaaagttacaagcgcaggccagcggcgtcgccctattggcggacgaacagttacagcaa
ctggaagctagtttgcaggcgcttactgacgaagagaaacgcctgctggccgaccagcag
gtacagcagcagcaccttcactggctgacccgaaaaaacgagctccacactgaattacac
gcccggcagcaggcgctgtacgcggcacaagaggcgcgagaaaaagcgcagccgcagctc
gcggcgttgactctggcgcaacccgctcgccagttgcgcccgcattgggagcgcattcag
gaacaaacccgcgccgttgagcgtgttcgccagcacagtgatgaagtgaatgctcgctta
caaagcgcgtatcgcctgcgccggcgtatccgcgcctgcgcgcatcgacaattcacgcaa
ctgaacgccacagggcagcggttgaagacatggctggcggaacacgacggcatccgcatc
tggcgcagcgaactggcggggtggcgagcattattaacacaacaatcccacgatcgggcg
caactgagccaatggcaacagcagttgctgagcgatacgcgtcagcgtgatgcgctaccg
ccgctcacgctcgacctcacgccacaggcgctggcggaggccagggcattgcatactcgg
cagcgtccgctacgccatcgtctcgccgcgcttcaggggcaaattctcccgaaacaaaag
cgtcaggcgcagctacaggcagctatcgcgcgtcatcatcaggaacaggcgcaatacacc
caacgtctggcggataagcgcctgagttataagactaaagcgcaggagcttgcggacgtt
cgcactatttgcgagcaggaggcgcgcatcaaagatctggaaagccagcgggcgcactta
cagtccggccagccgtgcccgctttgcggctcgacgacacaccccgccatcgccgcctat
caggcgctggagctgagcgcgaatcaaacccgccgcgacgcgctggaaaaagaggtcaaa
acgctggcggaagaaggcgctgcgctgcgaggacagttagatgccttaacgcaacaatta
cagcgggatgaaagcgaggcgcagtcgttgttgcaggaggagcaagcgcttactgaggaa
tggcaaacgctgtgcgctacgctgggcgttcagctccagccgcaagaagacctcgcgggc
tggctgaccgccgcggaagagcatgagcaacagttggatcagctcagccagcgtcatgct
ctacaaacgcaaatcgcggcgcatactgaacaggtagcgcgctttaccgcgcagattgcg
cagcgtcaggcgtcgctgacggctgatttggcgcagtatacgctttcccttccagcgcca
gaagacgaggcttcgtggctgaatgagcgcgccgacgaagcgaaaatatggcaacagcgt
cagaccgagttcgcggatttgcaaatgcagatcgacaggcttgccccgttgctggagacg
ctaccgcaaacggataccgcggattccgacgacgacgtgccgctggataactggcggcag
gcgcatgatgagtgcgtgtcattacaaagccagttgcaaaccctgcaggaacagacgacg
caggagcagcagcgcgccgccgaggcgatagcgcactttgatgcggcgttaaaaaatagc
ccgtttgacagccaggcaacgttcctggcggcgttgctggatgaagagaccgtgacccgt
ctggaaaaacaacaacaaacgctggaaagtcagctacaacaagcgaaggcgttaagcgcg
cagtccgcgcaggcgctggctgaccatcagcaacagccgcccgctggtctggacccaacg
tgtacggcggagcagctcgcgcagcggctgacgcagttggcgcaacaactgcgcgaaaac
acgacacgccagggggaaatccgccagcaaattaaacaggatgcagataatcggcagcgc
caacgcgcgctgatggcggaaatgaagcaagcctctcagcaagtggaagactggggctat
ctcaatgcgctgatcggctctaaagaaggtgataagttccgcaaattcgcccagggactg
acgctggataatctggtctggctggcgaatcatcagctcacccgcctgcatggccgctat
ttattgcagcgcaaagccagcgacgcgctggaactggaggttgtcgatacctggcaggcc
gacgccgtgcgcgatacgcgaacgttatcaggcggcgaaagtttcctggtcagcctggcg
ctggcgctggcgttatcagatttggtcagccataaaacgcgcattgattctttgttcctc
gacgaaggcttcggcacgcttgatagcgaaacgctggacgccgcgctggatgcgctcgac
gcgctgaatgccagcgggaagaccatcggtgtgattagccacgtggaagccatgaaagaa
cgtatccctgtgcagataaaagtgaaaaaaatcaatgggcttggttatagcaaactggac
aaagcgtttgccgtggagtaa
DBGET
integrated database retrieval system
