Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG0799
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Entry
SG0799 CDS
T00770
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
seg
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Pathway
seg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG0799 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seg03019
]
SG0799 (rhlE)
Enzymes [BR:
seg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SG0799 (rhlE)
Messenger RNA biogenesis [BR:
seg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG0799 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CAR36694
UniProt:
B5R787
LinkDB
All DBs
Position
862597..863958
Genome browser
AA seq
453 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHNLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGRGRGQNQGGAGRSQQPRRQDSG
AAKAKPKPRTGEGKPAGDKARPPRRPRRITPAQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggattaaaccctgatatcctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgattcccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattattg
cagcatctgattacccatcagccgcacgctaaaggtcgtcgcccggtgcgcgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggcgaaaacgtcagagattacagtaaa
tatctcaacattcgctcgctggtggtatttggcggcgtaagcatcaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctcgacctggaa
catcaaaatgccgtgaagctggatcagattgagattctggtactggatgaagccgaccgt
atgctggatatgggcttcattcacgacattcgtcgcgtgctggcgaaactgccggcgaag
cgtcagaatctgctgttctccgccacgttctctgacgacatcaaagcgctcgccgaaaag
ctgttgcgcaacccgctggaaatcgaagtggcgcgccgcaacacggcctcagagcaggta
acgcagcacgtgcactttgtcgataaaaaacgcaaacgtgaactgttgtcgcagatgatt
ggccagggcaactggcagcaggtgttggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggccgattttaaatccggcgatattcgcgtgctggtg
gcgacggatattgcggcgcgtggtctggatattgaagaactgccgcacgtggtcaactat
gaactgccgaacgtaccggaagattatgtacaccgtattggccgtaccggtcgcgcggcg
gcaactggcgaggcgctgtcgctggtctgtgttgacgagcataacttgttgcgtgatatc
gaaaagttgctgaaaaaagagatcccacgcattacgacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaacggtcgtcagcagcgcggcggcggcggtcgtgga
cgcggacaaaatcaggggggagcggggcgcagtcagcagccgcgacgccaggatagcggg
gcggcgaaggcgaaaccaaaaccgcgcacaggcgaggggaaacccgcgggcgacaaagca
cgtccgccgcgtcgcccgcgcagaatcacgcctgcccagtaa
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