Salmonella enterica subsp. enterica serovar Gallinarum 287/91: SG3173
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Entry
SG3173 CDS
T00770
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seg
Salmonella enterica subsp. enterica serovar Gallinarum 287/91
Pathway
seg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG3173 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seg03019
]
SG3173 (pnp)
03016 Transfer RNA biogenesis [BR:
seg03016
]
SG3173 (pnp)
Enzymes [BR:
seg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SG3173 (pnp)
Messenger RNA biogenesis [BR:
seg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SG3173 (pnp)
Transfer RNA biogenesis [BR:
seg03016
]
Prokaryotic type
tRNA degradation factors
SG3173 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAR38972
UniProt:
B5REN2
LinkDB
All DBs
Position
complement(3308517..3310652)
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaact
ggcatgatggcgcgtcaggccactgccgctgttatggtaagcatggatgacaccgccgta
ttcgttaccgttgtcggccagaaaaaagccaagccaggccaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgttaacgaagtgcaggttattgcgaccgtcgtttccgtt
aacccgcaggttaacccagacatcgttgccatgatcggcgcatccgctgcgctgtcgctg
tccggcattccgttcaacggcccaatcggcgcggcgcgcgtaggttacatcaatgaccag
tacgtgctgaacccgacccaggacgagctgaaagaaagcaagctggacctggtggttgcc
ggtaccgaagcggctgtgctgatggtggaatccgaagctgaactgctgagcgaagacact
atgctgggcgcggtggtattcggtcacgagcagcagcaggttgttatccaggcgatcaac
gatctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagccgtcaacgac
gcgttgaacgcgcgtgttgctgcgcttgctgaatctcgtctgagcgacgcgtaccgcatc
accgataaacaagaacgctatgctcaggttgacgtaatcaaatccgaaaccatcgagcag
cttattgcagaagatgaaactctggatgctaacgagctgggcgaaatcctgcacgccatc
gagaaaaacgtggtgcgtagccgcgtactggcaggcgagccgcgtattgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgcactggcgtactgccgcgtactcacggttcc
gctctgtttacccgtggtgaaacgcaggcgctggttaccgcgactctgggtactgcccgt
gacgcgcaggtgcttgatgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggacatggataaa
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcctctatg
gcttccgtgtgcggcgcttctctggcgctgatggacgctggcgtgccaattaaagccgcc
gtagcaggtatcgctatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attctgggcgacgaagatcacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgttgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggaacaggcg
atcaacgcgccgcgcggcgatatctctgaatttgcgccgcgtatccataccatcaagatc
agcacggacaagatcaaagacgtgatcggtaaaggcggttctgtgatccgcgcgctgact
gaagagaccggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcggcgacc
gacggtgaaaaagcgaaatacgctatccgtcgtatcgaagagattaccgcagagatcgaa
gtcggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgtttgttgcc
atcggcggcggtaaagaaggtctggttcacatctctcaaatcgcggataagcgtgtagag
aaagtgaccgattatctgcagatgggtcaggaagtcccggttaaggttctggaagttgac
cgccagggccgtgtacgtctgagcattaaagaagcaaccgagcagtctcaacctgcggct
gcgccggaagctccggcgagcgaacaggccgagtaa
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