Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_0200
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Entry
SPUCDC_0200 CDS
T02824
Symbol
pcnB
Name
(GenBank) polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Pathway
sega03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPUCDC_0200 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sega03019
]
SPUCDC_0200 (pcnB)
Enzymes [BR:
sega01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPUCDC_0200 (pcnB)
Messenger RNA biogenesis [BR:
sega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPUCDC_0200 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
AGU63148
LinkDB
All DBs
Position
complement(215824..217137)
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AA seq
437 aa
AA seq
DB search
MTIIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNAT
PDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRD
NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVR
MLRAVRFAAKLNMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGNGYETYQQLRE
YHLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLE
MAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRA
WKLMEHPKFRAAFDLLELRAQVENNTELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPR
RRRSRPRKRAPRREGTV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacgattatcccgcgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgcc
ctcaaggtactgtacaggctgaacaaagcgggctatgaagcctacctggtcggcggcggc
gtccgcgatctcctgctcggtaaaaagccgaaggatttcgacgtgaccaccaacgcaaca
ccggatcaggtacggaaattattccgcaattgccgtctggtggggcgtcgtttccgcctg
gctcacgtgatgtttggcccggaaattatcgaagtggcaacgtttcgtggtcatcatgaa
ggcagtgaaagcgaccgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgac
aacatcttcggctctatcgaagaagatgcccagcgccgcgatttcaccatcaacagcctt
tactacagcgtggcggattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaa
gaaggcgtgattcgcctgatcggcaatccggaaacgcgctaccgcgaagatccggttcga
atgctgcgcgccgtgcgtttcgctgcgaagctcaatatgcgtatcagccctgaaacggct
gagccaatcccgcgtctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaa
gagtcgctgaagctgttgcaggcggggaacggttatgaaacctatcaacaactgcgggaa
taccacctcttccagccgttgtttcctaccattacgcgttatttcaccgaaaacggcgac
agcgcaatggaacgcatcattgcgcaggtgttgaagaatacggataaccgcatccgtaac
gagatgcgcgttaatccggcatttttgtttgccgccatgttctggtatccgctgctggag
atggcgcaaaaaatcgctcaggagagcggccttgcctattacgatgctttcgcgctagcc
atgaatgatgtgctggatgaggcctgccgttcactggcgatcccgaaacgccttaccacg
cttacccgtgatatttggcagcttcagttacgcatgtcccgtcgccagggcaaacgcgcc
tggaagctgatggaacatcccaaattccgcgccgcgtttgatttgctggagctgcgcgct
caggtggaaaataatactgaactgcaacgtctggcgcagtggtgggccgagtttcaggct
tccgcgccgccggaacaaaaagggatgctcaacgagctggacgacgatcctgctccacgc
cgccgtcgttcacgtccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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