Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_1998
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Entry
SPUCDC_1998 CDS
T02824
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sega01002
]
SPUCDC_1998
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sega01011
]
SPUCDC_1998
Peptidases and inhibitors [BR:
sega01002
]
Cysteine peptidases
Family C82
SPUCDC_1998
Peptidoglycan biosynthesis and degradation proteins [BR:
sega01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SPUCDC_1998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGU64838
LinkDB
All DBs
Position
complement(1997265..1999115)
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AA seq
616 aa
AA seq
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MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAAPDLAGPQKQSAATAIM
AGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAARDMKPMWDNRDAVKVFQQQ
LAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGQRWLYSNK
PYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQYAPMHDALLKLVADSRPWPQLAN
TATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAQPV
DEQTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVL
ALNIQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNV
VVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNL
PFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELAN
MLLQDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLT
ARSSAQIVPKVEQLIR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaacaagatgtgtggtcgttgtctgtcggcaatcagtttatgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaaatgatacctggcgatagc
gccgttgccgcgccggatctagctgggccgcagaagcaatcagccgcgacggcgattatg
gccgggattcagccgctgccggagggcgtttcagccgagaaagtccgggctgatttacag
tcgcagcttccttccggctatacgccggtctatatgagccagctgacattgctgtatgcc
gcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagtcttccagcaacag
ttggcggaggtggcgattgccggattccagccgcagtttaccgcctgggtggcattgttg
accgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagacgctatgatgggc
tatctccatttcattgcgaatatccccgtcaaaggccagcgctggttatatagcaacaaa
ccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaaatcgcgctggaa
gaggggcagttgccgatgtttgtcgccagcctggcgccgcagcatccacagtatgcgccc
atgcatgacgcgctgctgaagctggtggcggactctcgcccgtggccgcagttggccaat
accgcaacgctgcgcccggggcaatggagtaacgatgtgcctgcgctgcgcgaaatatta
cagcgtacggggatgctggatggcggtccaaagatagccttacccggcgataacactgct
gatagcgccgtcgtcagcccctccgccgtggtcgacgaaacatcggtggcgcagccggtc
gacgaacaaacggcccgccgtagtaagccggctccggcggtacgcgccgcctacgataat
gaactggtcgaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggcgtt
attggcccggcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgtactg
gcactgaatatccaacgtttacgcctgctgccggcggaactctctaccggtattatggta
aacattcccgcttattcgctggtctactatcagaatggcaaccaggtgctggcttcgagg
gtgatcgtcgggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataatgtg
gtggtgaacccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccgaag
gtgtggaatgacccaggctatctggagcgccatggctacaccgtgatgcgcggctggaac
agcaaagaagcgatcgatccgtggcaggttgactggaccaccattacgccatcgaatctt
ccgttccgtttccagcaggcgccaggcgcgcacaattcgctggggcgttataaatttaat
atgccgagctctgatgcgatctatctgcacgatacgcctaaccatactctctttcagcgt
gacgccagggcgttaagttccggctgcgtgcgggtcaataaggcctctgaactggcgaat
atgctcttgcaggatgctggctggaacgatgcgcggatctcaggcgccctgaagcaaggc
gacacgcggtatgtcaatatccggcagaacattccagtaaatctttactatctgaccgcg
tttgtcggcgcagatggacgtatgcaatatcgtacagatatttacaattacgatctcaca
gcgcgatccagcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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