Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_2562
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Entry
SPUCDC_2562 CDS
T02824
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sega03400
]
SPUCDC_2562 (sbcC)
DNA repair and recombination proteins [BR:
sega03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPUCDC_2562 (sbcC)
Archaeal homologous recombinant proteins
SPUCDC_2562 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
DUF6918
nSTAND3
AAA_15
cobW
AAA_21
TsaE
ABC_ATPase
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AGU65378
LinkDB
All DBs
Position
2567835..2570975
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AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNQPDGNLQAPRVELARCS
DGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTE
IYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQ
VQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQ
EQTRAVERVRQHSDEVNARLQSAYRLRRRIRACAHRQFTQLNATGQRLKTWLAEHDGIRI
WRSELAGWRALLTQQSHDRAQLSQWQQQLLSDTRQRDALPPLTLDLTPQALAEARALHTR
QRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQAQYTQRLADKRLSYKTKAQELADV
RTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVK
TLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAG
WLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADLAQYTLSLPAP
EDEASWLNERADEAKIWQQRQTEFADLQMQIDRLAPLLETLPQTDTADSDDDVPLDNWRQ
AHDECVSLQSQLQTLQEQTTQEQQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTR
LEKQQQTLESQLQQAKALSAQSAQALADHQQQPPAGLDPTCTAEQLAQRLTQLAQQLREN
TTRQGEIRQQIKQDADNRQRQRALMAEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDKAFAVE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcgtctgaaaaacctgaactcgctgaaaggagaatggaaggtc
gattttaccgccgaaccgtttgccagtaacgggttattcgccattaccggcccgaccggc
gcgggaaaaaccaccttgcttgacgccatctgcctggcgttgtaccacgaaacgccgcgc
ctgaatacggtatcgcaatcgcaaaacgatttgatgacgcgcgatacggcggaatgtctg
gccgaagtggagtttgaggtaaaaggcgaagcctggcgcgcgttctggagccagaaccga
gcccgaaatcagcctgacggcaatctccaggccccacgcgtggagctggcgcggtgttca
gacggaaagatctttgccgataaggtaaaggataaactggagatgatcgccacgttgacc
gggctggactacgggcgcttcacccgttcgatgttgttatcacaggggcagttcgccgcc
tttcttaacgccaaagcgaaagagcgcgcagagcttctggaggagctcaccggcactgag
atttacgggcagatctccgcacaggtatttgaaaaacataaatcagcccgtctcgaactg
gaaaagttacaagcgcaggccagcggcgtcgccctattggcggacgaacagttacagcaa
ctggaagctagtttgcaggcgcttactgacgaagagaaacgcctgctggccgaccagcag
gtacagcagcagcaccttcactggctgacccgaaaaaacgagctccacactgaattacac
gcccggcagcaggcgctgtacgcggcacaagaggcgcgagaaaaagcgcagccgcagctc
gcggcgttgactctggcgcaacccgctcgccagttgcgcccgcattgggagcgtattcag
gaacaaacccgcgccgttgagcgtgttcgccagcacagtgatgaagtgaatgctcgctta
caaagcgcgtatcgcctgcgccggcgtatccgcgcctgcgcgcatcgacaattcacgcaa
ctgaacgccacagggcagcggttgaagacatggctggcggaacacgacggcatccgcatc
tggcgcagcgaactggcggggtggcgagcattattaacacaacaatcccacgatcgggcg
caactgagccaatggcaacagcagttgctgagcgatacgcgtcagcgtgatgcgctaccg
ccgctcacgctcgacctcacgccacaggcgctggcggaagccagggcattgcatactcgg
cagcgtccgctacgccatcgtctcgccgcgcttcaggggcaaattctcccgaaacaaaag
cgtcaggcgcagctacaggcagctatcgcgcgtcatcatcaggagcaggcgcaatacacc
caacgtctggcggataagcgcctgagttataagactaaagcgcaggagcttgcggacgtt
cgcactatttgcgagcaggaggcgcgcatcaaagatctggaaagccagcgggcgcactta
cagtccggccagccgtgcccgctttgcggctcgacgacacaccccgccatcgccgcctat
caggcgctggagctgagcgcgaatcaaacccgccgcgacgcgctggaaaaagaggtcaaa
acgctggcggaagaaggcgctgcgctgcgaggacagttagatgccttaacgcaacaatta
cagcgggatgaaagcgaggcgcagtcgttgttgcaggaggagcaagcgcttactgaggaa
tggcaaacgctgtgcgctacgctgggcgttcagctccagccgcaagaagacctcgcgggc
tggctgaccgccgcggaagagcatgagcaacagttggatcagctcagccagcgtcatgct
ctacaaacgcaaatcgcggcgcatactgaacaggtagcgcgctttaccgcgcagattgcg
cagcgtcaggcgtcgctgacggctgatttggcgcagtatacgctttcccttccagcgcca
gaagacgaggcttcgtggctgaatgagcgcgccgacgaagcgaaaatatggcaacagcgt
cagaccgagttcgcggatttgcaaatgcagatcgacaggcttgccccgttgctggagacg
ctaccgcaaacggataccgcggattccgacgacgacgtgccgctggataactggcggcag
gcgcatgatgagtgcgtgtcattacaaagccagttgcaaaccctgcaggaacagacgacg
caggagcagcagcgcgccgccgaggcgatagcgcactttgatgcggcgttaaaaaatagc
ccgtttgacagccaggcaacgttcctggcggcgttgctggatgaagagaccgtgacccgt
ctggaaaaacaacaacaaacgctggaaagtcagctacaacaagcgaaggcgttaagcgcg
cagtccgcgcaggcgctggctgaccatcagcaacagccgcccgctggtctggacccaacg
tgtacggcggagcagctcgcgcagcggctgacgcagttggcgcaacaactgcgcgaaaac
acgacacgccagggggaaatccgccagcaaattaaacaggatgcagataatcggcagcgc
caacgcgcgctgatggcggaaatgaagcaagcctctcagcaagtggaagactggggctat
ctcaatgcgctgatcggctctaaagaaggtgataagttccgcaaattcgcccagggactg
acgctggataatctggtctggctggcgaatcatcagctcacccgcctgcatggccgctat
ttattgcagcgcaaagccagcgacgcgctggaactggaggttgtcgatacctggcaggcc
gacgccgtgcgcgatacgcgaacgttatcaggcggcgaaagtttcctggtcagcctggcg
ctggcgctggcgttatcagatttggtcagccataaaacgcgcattgattctttgttcctc
gacgaaggcttcggcacgcttgatagcgaaacgctggacgccgcgctggatgcgctcgac
gcgctgaatgccagcgggaagaccatcggtgtgattagccacgtggaagccatgaaagaa
cgtatccctgtgcagataaaagtgaaaaaaatcaatgggcttggttatagcaaactggac
aaagcgtttgccgtggagtaa
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