Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_3371
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Entry
SPUCDC_3371 CDS
T02824
Symbol
yhdA
Name
(GenBank) putative lipoprotein
KO
K18765
RNase E specificity factor CsrD
Organism
sega
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Brite
KEGG Orthology (KO) [BR:
sega00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sega03019
]
SPUCDC_3371 (yhdA)
Messenger RNA biogenesis [BR:
sega03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPUCDC_3371 (yhdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
AGU66144
LinkDB
All DBs
Position
complement(3382600..3384540)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNSVQYKYVSRVQATATAIDTHLVTHDIVS
LTPQIDELMIASDIVRVDLLQGERSVYSHSRARGYRPAGTSDMYRELVVPLIKHPGMSLR
LAYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQRQLSGQELLEIRSTRILNGER
GANVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDTLIRSYAAQDTKTGLGNRLFFDN
QLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGNQAEEQMFMLINLLSTFIMRYPGSL
LARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDALPANKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAAARNAALQGGNSWAIYDDTLPEKGRGNVRWRTLIEQMLNRGGPRLYQKPAV
TREGRVHHRELMCRIYDGKEEVSSAEYMPMVLQFGLSEEYDRLQISRLITLLGYWPDENL
AMQLTVESLIRPRFQRWLRDTLMQCEKSQRNRIIIELAEADVCQHICRLQPILRLVNALG
VRVAVTQAGLTLVSTSWIKALNVELLKLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQV
YATGVRSRGEWQTLTKRGVAGGQGDFFASSQLLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttatcacgctgctcacggggttaacgatcttc
gtgactctgataggttgctcgctaagcttttataactccgtacagtataagtatgtcagc
cgtgtgcaggcgacggcgacagccattgatacgcacctggtgacccatgatattgtctcg
ctgacgccgcaaatcgacgaactcatgatcgcttccgatattgtgcgtgtcgatctgttg
cagggggagcgcagcgtctacagccattctcgtgccagaggttatcggccagccggcacc
agcgacatgtatcgcgagctggtcgtaccgctgataaaacatccaggaatgtcgctacgt
ctggcttatcaggacccgatgggtaactattttcactcactgatcaccacggcgccgcta
acgctggcgatcggttttatcgttctgattttgtttttatcggtgcgctggctgcagcgg
cagctttccgggcaggagcttctggaaattcgctcaacgcgtattctgaacggcgaacgc
ggggcgaatgtccgcggttctgtttacgaatggccagcgcgcaccagtagcgcgcttgat
gtattgctttccgaaattcagtttgctcacgaacagcgtagccgcctggacaccctcatt
cgctcctacgccgcgcaagacaccaaaaccggactcggtaaccgtctgttctttgataac
caactggcgacgctgctggaagatcaggaaaaagtgggagtgcatggcgtggtgatgatg
atccgcttgccagacttcaatcttctgcgcgacagcctgggaggcaatcaggcggaagag
cagatgtttatgcttatcaatctgctatcgacatttattatgcgttacccaggctcgctg
ctggcgcgttatcaccgcagcgactttgccgtgctgctaccgcatcgaacgctgaaagaa
gcggaaagtattgccggacaacttttaaaagctgtcgatgcgctaccggctaacaaaatg
cttgatcgtgacgatatggtacatatcggcatttgcgcctggcgcagcggacagtccacc
gagcaggtgatggaacatgctgaagccgcggcgcggaacgccgccctgcaggggggaaat
agctgggctatctacgacgacacgctgccggaaaaagggcgcggcaatgtgcgctggcgc
acattgattgagcagatgctgaaccggggcggaccgcgactttatcaaaaaccggcggtc
acgcgagaaggtcgcgtacatcatcgggaattgatgtgtcgcatctatgacggtaaagaa
gaggtgagctcggcggagtatatgccgatggtgttgcaatttggtttatcggaagagtat
gacagattacaaattagccgcctgattacgttgctgggctactggccggatgaaaatctg
gcaatgcagttgacggtcgagtcgctgattcgtccgcgttttcagcgctggttgcgcgat
acgttaatgcagtgtgaaaaatcacagcgaaatcgcataattattgaacttgcggaggca
gatgtttgtcaacacatctgtcggttacaacccatccttcgcttagtcaatgcgcttggc
gttcgggtggcggtgacacaggcgggtttgacgctggttagcacgagctggattaaagcg
ctcaatgtggaattactcaagctgcatccgagtctggtcagaaacattgagaagcgaacg
gaaaaccagcttctggttcaaagtctggtagaggcctgcgcgggtacgcctacgcaggtt
tacgcgacgggcgtccgttcgcgcggcgagtggcagacgctgacaaaacgcggcgtggct
ggcgggcagggtgatttttttgcctcctcccaactacttgacacaaacgtgaaaaaatat
tcgcaaagatactcggtttaa
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