KEGG   Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67: SPUCDC_3497
Entry
SPUCDC_3497       CDS       T02824                                 
Symbol
rhlB
Name
(GenBank) putative ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
sega  Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67
Pathway
sega03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sega00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPUCDC_3497 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sega03019]
    SPUCDC_3497 (rhlB)
Enzymes [BR:sega01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPUCDC_3497 (rhlB)
Messenger RNA biogenesis [BR:sega03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SPUCDC_3497 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AGU66265
LinkDB
Position
3523112..3524377
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccacaggtg
gttgaagcccttgaaaaaaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtcaacgtttcattatttactttctcatcccgcgatcgacgatcgc
aaggtgaaccagccgcgcgcgctgatcatggcgccgacgcgtgaattagccgtacaaatt
cacgcagacgcggagccgttggcgcaagcgacaggcttaaaattaggcctggcttacggc
ggcgatggttacgacaagcagcttaaagtgctggaaagcggcgttgatattcttattggt
acgacgggccgactgatcgactacgccaaacaaaatcacattaacctcggcgccattcag
gtcgtcgtactcgatgaagccgatcgcatgtacgatttgggttttattaaagatatccgc
tggctgttccgccgtatgccgccggctgcgcagcgtctgaacatgttgttctccgccacc
ctgtcttatcgggttcgcgagctggcgtttgaacagatgaacaacgccgaatatgttgaa
gtggaaccggagcaaaagaccggccaccgcattaaagaagagcttttctacccctctaat
gaagagaaaatgcgtttactgcaaacgctgatcgaagaagagtggccggatcgcgccatt
attttcgccaacaccaagcatcgttgcgaagatatctggggacatctggcggcagatggc
catcgtgttggtctgctgaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gagttcacccgcggcgatctggatattcttgtggcgaccgatgtcgcggcgcgcgggttg
catatccccgccgtaacgcacgtctttaactacgatctgccagacgattgtgaagactat
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcgggcattccatcagcctggct
tgcgaagagtatgcgctgaatctgcccgccattgagagctatatcggccactcgattccg
gtcagcaaatacaatccggaagcgctcatgaacgatctgcccaagccgttgcgtctgacg
cgttcgcgtcctggcaatggtccgcgccgcgctggcgctccgcgtaatcgtcgtcgttca
ggttaa

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